7 homologs were found in PanDaTox collection
for query gene MADE_00880 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_00880  phosphate-selective porin O and P  100 
 
 
333 aa  672    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4230  hypothetical protein  24.93 
 
 
323 aa  74.3  0.000000000003  Opitutus terrae PB90-1  Bacteria  normal  0.241727  normal  0.40415 
 
 
-
 
NC_009831  Ssed_3889  phosphate-selective porin O and P  38.2 
 
 
395 aa  48.9  0.0001  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.00000019269  decreased coverage  0.000370882 
 
 
-
 
NC_007404  Tbd_0706  putative signal peptide protein  28.57 
 
 
407 aa  48.1  0.0002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.278446  normal  0.126589 
 
 
-
 
NC_008700  Sama_0589  phosphate-selective porin O and P  25.48 
 
 
391 aa  47.4  0.0004  Shewanella amazonensis SB2B  Bacteria  unclonable  0.0000000499281  unclonable  0.0000111386 
 
 
-
 
NC_009092  Shew_3120  phosphate-selective porin O and P  31.46 
 
 
390 aa  43.1  0.006  Shewanella loihica PV-4  Bacteria  unclonable  0.00000046634  unclonable  0.00000572585 
 
 
-
 
NC_007954  Sden_0527  hypothetical protein  33.71 
 
 
412 aa  42.7  0.008  Shewanella denitrificans OS217  Bacteria  unclonable  0.000000000103666  n/a   
 
 
-
 
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