Gene MADE_00880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00880 
Symbol 
ID6778750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp929525 
End bp930526 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content43% 
IMG OID642754312 
Productphosphate-selective porin O and P 
Protein accessionYP_002125188 
Protein GI196155699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATGA AACTAGCCCA AACATTAAAA CCAGCCGCGG CCGTTGGATT TATCGCTTTG 
AGTCTCACAG GTACGGCGCA CGCGGACGAT AAATTTAAAT TAACTGACAG TCTTTCGGTT
ACTGGCTTTA TTGATATGTC GTGGTCGTCA GTTGACGTTG AAGGAGTTGG CACCGAACAG
TCATCCGGTT TAGATCAATT CGAAATAGAT TTTCTTTATA GTTTTGACAG TAAGTTTTCA
GCGCAAGTTG ACTTGGAATA CCAAGACAAC GGAACTGGAG AGGAAGTCGA CATTGAACAA
GCTTTTATTT CCTACGCAGT ATCAGAAAAT TTTAGTGTAA AAGCAGGACG TTTTCTTAGT
TATACAGGTT GGGAAACGGA AGAACCAACG GGTCTCTATC AGTACTCAGG AACTGGCTAT
GCCGCATACT TTTACGGTGG TTATCAGCAG GGAGTTTCAG GTTTTTACAA GGGAAATGGC
TACCAAGTTG CCTTGTCATT GGTTAACGAT TTAGGGGACT TAGAAGGTGA GAACAGGGAT
ACAGATCATC CTGCGTTTGA AGCAATGTTA GCAGTTACGC CCACTGAAGC CACAATTGCA
AAAGCTTTTT ATTCAAGCGA CAAGCTCGAC GGAACAGATG AAACTACCAC ACTGGTAAAT
TTGTGGGCCG CGTATATAGA AGGCTCTCTC ACCCTTGCCG TTGAATATAA CACTTCAGAA
AACGCTCCAG CTTATGCCTA TCGCTATGGC ATCGATTCAG AAGCCTCTGG TTACTTAATC
ATGGGCAATT ACGCAATGAA CGATTTTGCT ATTACTTTAC GTTATCACGA CTATGCAATC
GATGATGCAA GTGGCGCAGA AGTAGAAGAT GGCAGCGCTA TCACGATTGC ACCAAGCTAT
ACCTTTACCA AAAACCTATG GGTGGTATTT GAATACCGAA TGGGTGAACA AAATGGGGTA
GATGTAGACC TTATGGCCCT TGAAGCACTA GTTACTTTCT AA
 
Protein sequence
MQMKLAQTLK PAAAVGFIAL SLTGTAHADD KFKLTDSLSV TGFIDMSWSS VDVEGVGTEQ 
SSGLDQFEID FLYSFDSKFS AQVDLEYQDN GTGEEVDIEQ AFISYAVSEN FSVKAGRFLS
YTGWETEEPT GLYQYSGTGY AAYFYGGYQQ GVSGFYKGNG YQVALSLVND LGDLEGENRD
TDHPAFEAML AVTPTEATIA KAFYSSDKLD GTDETTTLVN LWAAYIEGSL TLAVEYNTSE
NAPAYAYRYG IDSEASGYLI MGNYAMNDFA ITLRYHDYAI DDASGAEVED GSAITIAPSY
TFTKNLWVVF EYRMGEQNGV DVDLMALEAL VTF