| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00372 |
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| Symbol | |
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| ID | 6778541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 390076 |
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| End bp | 391356 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642753801 |
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| Product | putative RND efflux system protein |
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| Protein accession | YP_002124684 |
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| Protein GI | 196155195 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTT CACAGTTTCC TGTGCGCAAA TTTACGCGCG CCGGAATATT GACTAGTGCA
TTGATGCTAT CTCAAGCCAA TGCATTGGCA GAACAAGTAA CTTTAGATGA TGCAGTTCAA
CTTACTCTCA ACCGTCATCC AAGCTTGTTG AAATTCAGAC CTCTTACTAG AGCTCTTGAG
GGAGATCGCC AACAAGCTTT GCTTTCTCCA GCTTACACCG TAGGTGCTAA TCTAGAAAAT
GTGATGGGCA CAAGTTCTAC TTCGGGAGTT CAAGCAGCAG AAGCAACCAT CTCTCTATCT
TCAGTGTATG AACTTGGTGG AAAGAAGAGT GCAAGAACAC TGGTTGTGGA TGCCAGAGCT
GCCCTTTTAG ATTCAGAGCA GTATTCAATG TCTCTCTCAC TACTTGGTGG GCTCACTCAG
CAGTATATTC GCGTTCTGGC ACAACAGGAG CGTCTGCAAA TAGCTGAGCG AAGTGTGAGC
TTAGCTGAAG ATGCTCTTAC TGTGATCACT AATAGAATAA AAAGTGGTGC AACGAATGAT
GCTGAATTGT TCAGAGCTAA ATCGGCTTTA AATCAAGCGA AATTAGAACT TGCGACAGCA
AAGGTGAATA AAGAGATAGC CCTGCAATCT CTCACACTAT TCTGGCAGGG CAATTATGAA
GATATCACGC TTACTGGTTC TTTAAATTCA CCCGCTAAAA ATTATTCCTA CGAAACACTT
TTTAACCAAT TCTTATCATC ATCGAATGCG GATTTACTAA TTAAGTCACT TGACCTGAAG
GACGCTGAAA TTCAGTTGGC TAAGTCTGAT AATACCGCAG ACCTATCTTG GTCTGTTGGT
GTTAGAAGGA ATCAGGGAGC TCAAGATACA TCGTTAGTTT TTGGTGCCTC AATTCCACTA
TTTGCTGAGA AGAGGAATTC GGGTGCAGTC AAATCTGCAA TTGCTAGTAA GGAGGCGGAG
TTATTAGAGC GAGACACCAA GTATCTCGAT GTAAAAGCGA TTCTATTTAA AGCAACGAAA
AGCATAAATT TTAGTTCACA GGCAGCATTG CACCTGGAAA AAGAAGTAAT GCCAGATTTG
AAAAGAGCAT TGGAGCTGAC CAAGGAGGGC TATCAAAAGG GAATTTACAC TTATCAAGAA
TGGTTTGCTT CACGTGATGC ACTTCTCCAA TCTCAACGGA GTCTCATCAA CTATCGCGAA
GCCACCCTGC TCAATGAAGC ACTTATCGAA CAATGGACAG GGCAATCTCT GAAATCATTC
ACTTTCAATC TCCAGGATTA A
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| Protein sequence | MKISQFPVRK FTRAGILTSA LMLSQANALA EQVTLDDAVQ LTLNRHPSLL KFRPLTRALE
GDRQQALLSP AYTVGANLEN VMGTSSTSGV QAAEATISLS SVYELGGKKS ARTLVVDARA
ALLDSEQYSM SLSLLGGLTQ QYIRVLAQQE RLQIAERSVS LAEDALTVIT NRIKSGATND
AELFRAKSAL NQAKLELATA KVNKEIALQS LTLFWQGNYE DITLTGSLNS PAKNYSYETL
FNQFLSSSNA DLLIKSLDLK DAEIQLAKSD NTADLSWSVG VRRNQGAQDT SLVFGASIPL
FAEKRNSGAV KSAIASKEAE LLERDTKYLD VKAILFKATK SINFSSQAAL HLEKEVMPDL
KRALELTKEG YQKGIYTYQE WFASRDALLQ SQRSLINYRE ATLLNEALIE QWTGQSLKSF
TFNLQD
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