Gene M446_6333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6333 
Symbol 
ID6135050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6955765 
End bp6956553 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content76% 
IMG OID641646428 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001773032 
Protein GI170744377 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.618077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00821783 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGACC GCCTCATCGG AAAAACCGCG ATCGTCTTCG GCGCCGGCTC GGCCGGAACG 
GGCTGGGGCA ACGGCAAGGC CGCGGCCGTG GCCTTCGCGC GCGAGGGCGC GCGGGTGGTC
TGCGTCGACC GGCTGGCCGA GGCCGCCGAG GAGACCGCCC ACCTGATCGC CGAGGAGGGC
AACGACGCCG AGGCGCTCGC CGCGGACGTG ACCGATTCCG AGGCGGTGGT GCGGGCCGTC
GCGGCGGCCG AGCGGCGCTT CGGGGGCATC GACATCCTGC ACAACAATGT CGGCCTGGCC
GAGCCCGGCG GGCCGGAGGA CCTCGACGAG GCGGCGTGGC GGCGCGCCAT CGAGGTGAAT
GTCGGCGGGG TCTGGCGCAC CTGCCGGGCC GTGCTGCCCG GCATGCGGGC GCGCCGGCGG
GGGGCCGTCG TCAACATCTC GTCCGTGGCC TCGATCCGCT GGACCGGGGC AGCGGCCTTC
GCCTACGGGG CCGCCAAGGC CGCGGTGAAC CAGGCGACGG TCGCGGTGGC GATGCAATAT
GCCCGCGACG GCATCCGGGC GAACGCCATC CTGCCGGGGC TCCTCGACAC GTCCCTGCGC
GACGATTGCC GGGCGGCCGG GACCCGCGAC GCGGGCCGCG ACCGGCTCGT GCCCCTCGGG
CGGCTCGGCG AGGCCTGGGA CATCGCCCAC GCGGCGGTGT TCCTGGCCTC GGACGAGGCC
CGCTTCATCA CCGGCGTCTG CCTGCCGGTC GATGGCGGCC AGAGCTGCAG CATGGCCCAC
CTCGCCTGA
 
Protein sequence
MPDRLIGKTA IVFGAGSAGT GWGNGKAAAV AFAREGARVV CVDRLAEAAE ETAHLIAEEG 
NDAEALAADV TDSEAVVRAV AAAERRFGGI DILHNNVGLA EPGGPEDLDE AAWRRAIEVN
VGGVWRTCRA VLPGMRARRR GAVVNISSVA SIRWTGAAAF AYGAAKAAVN QATVAVAMQY
ARDGIRANAI LPGLLDTSLR DDCRAAGTRD AGRDRLVPLG RLGEAWDIAH AAVFLASDEA
RFITGVCLPV DGGQSCSMAH LA