Gene M446_6005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6005 
Symbol 
ID6132247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6592281 
End bp6592973 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content80% 
IMG OID641646104 
Productthiamine monophosphate synthase 
Protein accessionYP_001772716 
Protein GI170744061 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00666288 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGACCC CCCATCCCCC GAAGACCCGC CTCGTCCTGA TCGCCGGCCC GGAATCCGGC 
CCCGATCTCG CCGCGCGCCT CTCGGCCGCC TGCCGGGCCG GGGACGTGGC GGCGGTGATC
CTGCGGCTGG CCGCCGCCGA CGAGCGCGCC CTGATCAGGC GCGTCAAGGA CGTGGCGCCC
GCCGTGCAGG AGGCCGGCGC CGCCCTGGTG GTCGCCTGCG ACGCGCCGGG CATCGACCCC
GTGGCCCTCG CCGCCCGGGC GGGGGCGGAC GGCGTCCACG CGGGGGCGGG CGAGGAGCCC
GGCGAGGCCC TGCGCGACCT GCGCGAGCGC CTGCGCGACG GGCGCATCCT CGGGGTCGGA
TCCCTGACCT CCCGCCACGC CGCCATGGAA GCCGGGGAGG CGGGAGCCGA TTACGTGCTG
TTCGGCGAGG AGCCCCGGGC CACGCCCGCC GGCACCCGCG CCCTCGCCGC GTGGTGGGCG
GAGATCTTCG AGACCCCCTG CGTGGCCCTG GCCCGCAGCC TCGACGCGGT CGCGGACCTC
GCCGCGACCG GGGCCGAGTT CGTCGCCCTC GACCCCGCCC TGTGGGAGGG CCCCGCCCTC
CGGGAGGGCC CCGCCCTCCG GGAGGGCGCG GGCACCCAGG GCCCCGACGC CGTGGCGCAG
GCCCAGGCGC GGCTGGCGGG AGGCGCCGCG TGA
 
Protein sequence
MPTPHPPKTR LVLIAGPESG PDLAARLSAA CRAGDVAAVI LRLAAADERA LIRRVKDVAP 
AVQEAGAALV VACDAPGIDP VALAARAGAD GVHAGAGEEP GEALRDLRER LRDGRILGVG
SLTSRHAAME AGEAGADYVL FGEEPRATPA GTRALAAWWA EIFETPCVAL ARSLDAVADL
AATGAEFVAL DPALWEGPAL REGPALREGA GTQGPDAVAQ AQARLAGGAA