Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6005 |
Symbol | |
ID | 6132247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 6592281 |
End bp | 6592973 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 641646104 |
Product | thiamine monophosphate synthase |
Protein accession | YP_001772716 |
Protein GI | 170744061 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00666288 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCGACCC CCCATCCCCC GAAGACCCGC CTCGTCCTGA TCGCCGGCCC GGAATCCGGC CCCGATCTCG CCGCGCGCCT CTCGGCCGCC TGCCGGGCCG GGGACGTGGC GGCGGTGATC CTGCGGCTGG CCGCCGCCGA CGAGCGCGCC CTGATCAGGC GCGTCAAGGA CGTGGCGCCC GCCGTGCAGG AGGCCGGCGC CGCCCTGGTG GTCGCCTGCG ACGCGCCGGG CATCGACCCC GTGGCCCTCG CCGCCCGGGC GGGGGCGGAC GGCGTCCACG CGGGGGCGGG CGAGGAGCCC GGCGAGGCCC TGCGCGACCT GCGCGAGCGC CTGCGCGACG GGCGCATCCT CGGGGTCGGA TCCCTGACCT CCCGCCACGC CGCCATGGAA GCCGGGGAGG CGGGAGCCGA TTACGTGCTG TTCGGCGAGG AGCCCCGGGC CACGCCCGCC GGCACCCGCG CCCTCGCCGC GTGGTGGGCG GAGATCTTCG AGACCCCCTG CGTGGCCCTG GCCCGCAGCC TCGACGCGGT CGCGGACCTC GCCGCGACCG GGGCCGAGTT CGTCGCCCTC GACCCCGCCC TGTGGGAGGG CCCCGCCCTC CGGGAGGGCC CCGCCCTCCG GGAGGGCGCG GGCACCCAGG GCCCCGACGC CGTGGCGCAG GCCCAGGCGC GGCTGGCGGG AGGCGCCGCG TGA
|
Protein sequence | MPTPHPPKTR LVLIAGPESG PDLAARLSAA CRAGDVAAVI LRLAAADERA LIRRVKDVAP AVQEAGAALV VACDAPGIDP VALAARAGAD GVHAGAGEEP GEALRDLRER LRDGRILGVG SLTSRHAAME AGEAGADYVL FGEEPRATPA GTRALAAWWA EIFETPCVAL ARSLDAVADL AATGAEFVAL DPALWEGPAL REGPALREGA GTQGPDAVAQ AQARLAGGAA
|
| |