| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5910 |
|---|
| Symbol | |
|---|
| ID | 6135950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 6501129 |
|---|
| End bp | 6503348 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641646014 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_001772626 |
|---|
| Protein GI | 170743971 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2202] FOG: PAS/PAC domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA TCGACACGCG ATGGCCCTTC GGGGACGGGG AGATGGCAGG GCGCATCCGT
GACTTCGACT GGTCGGCAAC GCCGCTCGGG CCGATCGCAG ACTGGTCGGA GCGCCTGAAG
CTGGCAGTCG AACTCATGCT TGCCAGTCCG CTCGTGTCGA CACTTGCGTG CGGGCCGCAG
CGCCTCCTCC TCTACAACGC CGCGGCCGCC CGGCACTTCG GCGACCACCA TCCCGCCGCA
CTTGGCCGGC CCCTGCCCGA TACCTTCTCC GTGGGGTGGG CGACCGTGGC GCCCTACTAC
GCGCGTGCCT TCGGCGAGAC GGTGAAGGTC GGCGGCCAAC CTCTTGACAC GCGCGGCGAG
GGCGTCGCGA AGGATGTGTT CGACGCGCTG CTTGCGCCCG TGCGCGAGAG AGACGGCTCC
ATCGCCTACG TTCAGATGAC TGGTGCAGAA GTGGGCGACC GCGCGCGGAT GGAGGCGGCG
TTGCGCGAGA GCGAGACGCG GCACCGCCTT CTGATCGAGA GCTGGGCGCA AGCCGTGTGG
GAGACCGATG CCCATGGCAT CGTCGTCGCC GACAGCCCGA GCTGGCGTGC CTATACTGGC
CAGACCGTGG AGGAGTGGCT TGGATACGGT TGGTTGGACG CGATCCATCC CGACGACCGC
GCCTTCGCCG AACACCAATG GCGCGAGGCA ATCGCAGCTC GCCGGCTCGT CAACGCCGAG
TTCCGTCTTC GTGCCCCCGA TGGTGGGTGG CGTTGGACCA ACGTCCGCGC TGCTCCCGTG
CTCGATGCGG GAGGGAACAT CGAGAGGTGG GCGGGCCTGA ACATCGACAT CGACGACTGC
AAGCGCGCCG AGGCGATGCA ACGCGAGAGC GAGGAGAAAT ACCGCTCCCT CTTCGAGTCC
ATGGACGAGG CCTACGCCGT GATCGAGGTG CTCCAGGACG GCGCCGGCAA GTGGGTGGAT
TTCCGGTTCC TCAATGTGAA CCGCGCCTTC GTGAAGCATA CGTCGATGCC CTACCCCGTG
GGCAAGACAG CGACGGAGCT ACTTGGGTCA CCGAACCCGC GCTGGACGGA ACTCTATGGC
CAGGCGCTCG ATACCGGCGA GCCGATCCGG ATCGAAGAAA CCGAACATAC GCTCGGCCGC
ACGTTCGACC TCAACATCTT CACCTTGGAT GGGGCCCAGA ACCAAGTCGC CGTTCTCTTC
ACCGACATCA CCGCACGCAA GCGCGCCGAG GCTGCGTTGC GCGAGGGTGA GGAGCGGCAG
GCGTTCCTGC TGAAGCTCAG CGACGCGCTG CGCCCCATCG GTGACGCGCA AACGTTGCGA
GCAACGGCCT GCCGCATGTT GGGCGAGGGC CTGTCCGCCT CGCGCGTGTA CTACGTGGGG
TACGAGCCGC AGGCGGGCTA CGGACAGGTT GCGGACGACT ATTTGGTGGA TGGTCTGCCG
AGCCTCGCCG GGCAGTACCC GTTCGAGGCG TTTCGCGCGA CCTACGGGCG TATCGCGGAC
GGCGCCACCT GGATCGTTCC CAACGTGTGG GAGGCCACCG ACCTGCCCGA GCACGAACGT
GAGTATTACG CCGCGCAAGA TGTGAGCGCT TGGGTCAGCG TGCCCTTGGC GAAGGACGGG
ACACTAGAGG CGGCGCTCTG CATCGTGCAG TCTTCGGCGC GAGGATGGAC CCCGGTTGAG
ATCGCCCTCG TTGAGGAGAC AGCAGAACGC TTGTGGTCAG CGATCCAGCG TGACCGCGCG
GAGACGGCGC TGCGCGAGAG CGAGCAACGC TTCCAGCAGT TCGCTCGTGA CTCCTCCGCC
GGTCTCTGGA TCAGGGTAGC CGAGACCCTG GAGATGGAGT TCGTCAGCCC TGCTGTCGGC
GCCATCTACG GCATGGAGCC GGACGCCTTG CTCGGTGATG TGAAGCGCTG GGCTTCGGTA
ATAGTACCGG AGGAGCGCGA GGCAGCGATG GGGCACCTGC AGGCAGCACG CGCCGGCAAC
ACGTCCGTTC ATGAGTTCCG CATCCAACGC CCTTCCGATG GCGCCTTTCG CTGGATCAGG
AACACGGACT TCCCGTTGCG CGACGACGGC TACATCCCCC GCGTGGGCGG CATCGCCGAG
GACATCACCG AGACGCAACG GCTCAACGAG CACCAGGGTG TGCTGCTGCA TGAGTTGCAG
CACCGGGTTC GCAACATCAT GGGCATGGTG ACCCTCCCTC GAGTTGGTGG ACGCCTCTGA
|
|---|
| Protein sequence | MTQIDTRWPF GDGEMAGRIR DFDWSATPLG PIADWSERLK LAVELMLASP LVSTLACGPQ
RLLLYNAAAA RHFGDHHPAA LGRPLPDTFS VGWATVAPYY ARAFGETVKV GGQPLDTRGE
GVAKDVFDAL LAPVRERDGS IAYVQMTGAE VGDRARMEAA LRESETRHRL LIESWAQAVW
ETDAHGIVVA DSPSWRAYTG QTVEEWLGYG WLDAIHPDDR AFAEHQWREA IAARRLVNAE
FRLRAPDGGW RWTNVRAAPV LDAGGNIERW AGLNIDIDDC KRAEAMQRES EEKYRSLFES
MDEAYAVIEV LQDGAGKWVD FRFLNVNRAF VKHTSMPYPV GKTATELLGS PNPRWTELYG
QALDTGEPIR IEETEHTLGR TFDLNIFTLD GAQNQVAVLF TDITARKRAE AALREGEERQ
AFLLKLSDAL RPIGDAQTLR ATACRMLGEG LSASRVYYVG YEPQAGYGQV ADDYLVDGLP
SLAGQYPFEA FRATYGRIAD GATWIVPNVW EATDLPEHER EYYAAQDVSA WVSVPLAKDG
TLEAALCIVQ SSARGWTPVE IALVEETAER LWSAIQRDRA ETALRESEQR FQQFARDSSA
GLWIRVAETL EMEFVSPAVG AIYGMEPDAL LGDVKRWASV IVPEEREAAM GHLQAARAGN
TSVHEFRIQR PSDGAFRWIR NTDFPLRDDG YIPRVGGIAE DITETQRLNE HQGVLLHELQ
HRVRNIMGMV TLPRVGGRL
|
|---|
| |