Gene M446_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3310 
Symbol 
ID6134262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3669723 
End bp3670811 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content62% 
IMG OID641643496 
Productmultidrug resistance efflux pump-like protein 
Protein accessionYP_001770148 
Protein GI170741493 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.603844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC TCAAGGTGAG CCAGATGAGC TGGGGCAAGC TGTTCCGAGT TCTCGTGACC 
GGTACTGCGG TGATCGGCAG CGGAGCGATA GGCTTCTATT ATTACTCAAG TGGCGTTCTG
GTTCTGAATG CGGACGGTTT GGTCACGCGC GACCGAGTCT ACGTGGCGAC GCCCTATGAT
GCCCGCGTCC GTGAGGTCTT CGTGCGCCCG GGCGACACGG TCGTCGCCGG CCAGAAGATT
GCTGTGGTCG ACTCTCCCTC GATCTCGAAG ACGCTCGCGG AATTCTCCAT TGAGCGCGCG
AAGATCTCCT CGCGCGTCGC TCAACTCGAG GCCCGCACGA CGATCGTGGC CGCGATGGTC
CCTGTCGCCC GTGCCGGCGC GAAGCAGGCC AACGAGTTCA TGGCCGACTT GAACAAGGCT
AAGAGTTCGG GTCTTGCCCT CAACCGCTCG CTGCATGAGG TCACCGCCGC ATCATTCACC
GCGACCGAGC GCCTGCTCAC GATGATCTCC GAGAAGATCT CGCTCGATAC GGAACTCGCG
TCGAACCGGG CGGCGCTCGC CGAAATCACC AGTGCTTCCG ACAACCTGCG CAGGGTCTAC
GCGGACGGCG TGCTCACCGC GCCGGTCTCC GGCGTCGTCG GAAGCGCGAT CGCGAGCCCC
GGCGAGGTCC TCACGCCAGG CTCGAATCGG CTGGCCTCGA TCTACACCGG CACGAGTTTC
GTGCTCGCCT ACATGCCTGA AAGCTATCTC TTCGAAGCTG CCGAGGGCCA GTCGGTGCAG
GTCTCCGCCC ATCGCCAGAG TGTGTCGGGC CAGATCGCCC GCATCCTTCC GGTCACCGAC
GCGCTGCCCC CCGAGTTTCA GCCCCCGAAC AGGGCGCGCG ATCGCGGGCA GGTCGTCAAA
ATCTCATTGA ACGATGCTGA CCGCTTCGCG GTGGATCAGA AAATTCGCGT CTCAAGTTGC
ATCGTGACCG GATGTAAAGA GAGCTACGTC GAGCAGGCCA AGGCTCGCGT GATCCTGACA
TTCGGAAATT TGCTGTCCAG CCCAGCTCAC GCTGAGCGGA TTAAGCGAGA AGCATCAGTA
AAGCCATGA
 
Protein sequence
MSELKVSQMS WGKLFRVLVT GTAVIGSGAI GFYYYSSGVL VLNADGLVTR DRVYVATPYD 
ARVREVFVRP GDTVVAGQKI AVVDSPSISK TLAEFSIERA KISSRVAQLE ARTTIVAAMV
PVARAGAKQA NEFMADLNKA KSSGLALNRS LHEVTAASFT ATERLLTMIS EKISLDTELA
SNRAALAEIT SASDNLRRVY ADGVLTAPVS GVVGSAIASP GEVLTPGSNR LASIYTGTSF
VLAYMPESYL FEAAEGQSVQ VSAHRQSVSG QIARILPVTD ALPPEFQPPN RARDRGQVVK
ISLNDADRFA VDQKIRVSSC IVTGCKESYV EQAKARVILT FGNLLSSPAH AERIKREASV
KP