Gene M446_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3022 
Symbol 
ID6129060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3341865 
End bp3343910 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content79% 
IMG OID641643213 
Productglycosyl transferase family protein 
Protein accessionYP_001769867 
Protein GI170741212 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.043835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCGG CCACCCTGAG CCCGGCCACC CGCCGCGAGG GACGCATCGA CGACATGCTG 
GCGGAGACCT CGACAGCGCC CGAGCGTGAT TGGCTGGATC TCGGGTCCTC CCCGGCTCCC
GCCCCTCCCC CGCCGCAGGC GCCGCCTCCC GGATGGTCCG CCCGGATCGC CGGAGAGGCC
GTCCGCGTCG GACAGGCGGT CGCCGCGCGC TGGCAGCCGG CCCTCGCCGC CAGGGTCGCG
CCCCTGCGCC TCGCGGCGGG CCGCGCCGGC GCCCGCCTCG CCGCCCATCC CCTGGCGCGG
CGCGCCCGCT CCGGCGCCGG AGCCGCGGCC GAGCGCCTCG CCGCCCTGCG CTGGAGCCGG
CTCGCCCTCA CCCTCGGCCT GCTCCTCCTC GTGGGCTGCG CCGCGCTCCT CGCCGTGAGC
GCCGCGACCC TGCCGCGCCT CGACGGGCCG GGCCCGGCCA GCGCGCCGGT CACCGTCAGG
GCCGAGGACG GCGAAGTGCT CGCCACGCGG GGCAGCCTGC GGGGCAGGCC CCTGCCCGCC
TCGGCCATCG CGCCGGCGAT GCGGCGCGCG ATCATCGCCG CCCAGGATCC GTGGTTCATG
GACCCCCACC GGCTCGACGC CGCCGGCGTC GCGGCGGTGA TCCGCGGCGC CTTCCGGGAC
ACGATCAGCC CCGGCCCGCG CGAGGGCAGC GCGCGGCTCA CCCAGCGCCT CGTGCGCACC
CAGCTCCTCG GCGGCGAGCG CGGCCTCGTG CGCAAGCTGC AGGAAGCGAT GCTGGTGCTC
TGGCTGCAGG CGCGGGCCAG CCCCGACGAG ATCGTGGCGC GCTTCCTGAG CGGTGCCGCC
TTCGGCCCCG ACCTGATCGG GCTCGACGCC GCGAGCGAGC GGCTGCTCGG CAAGGCCCCG
CGCGACCTCA CCACCGCGGA GGCCGCCCTC CTGGCCGGGC TCACCCTGCC CCCCGCCGAC
CTCCGGCCGG ACCGCGACGT GGAGGCCTCC CGTGCCAGGG CCCGGGGCGT CCTCGACGCC
ATGGTGATGA CGGGCGCCAT CACGCGCCTG GAGGCGGAGG AGGCGGGCCG CGCGCTCGCG
GCGATCAAGT CGCCCACCGC GACGGCGGTC ACCCGCAGCG GGGTCGTCGA CCTCGCCGTG
CTGGCGGCCC GCGACCGCCT CGGCGACGAG GTGCGGAACG CCTCGCTGCG CATCTCCCTC
GACCGGTCGC TCCAATCCGC CGCCGAGGCA GCCGTGAACA AGCGCCTCGA CGTGGCGGCC
AGGAACCGGG GCGACCGGGC CGGGCTGGTG GTCCTCGGCC CCGACGGGGC AATCCTCGCG
GCGGTGAGCG GCGGCAGCCC GCTCGCGGCC GATCCGGCCG GGCGCGCCGC CGCGGAGGCG
AGCCTGCGCC GGGTGACCCG CGACGGGCGC CCGGTCTACG ACCGGCCCCA GGCGGCCACG
CTCGACCCCG CGACCGTGCG GGCGCGGGCC TTCGCGCTGC TGTCCGGCCT CGCCCGCTTG
CCCGAGGGCG TCGCGGCGGC ACCCGCCGCC CGGGACGGCC TCGCGGTCGG GCCGGCCGGC
GACGTCACCC TGGGCGTCTG GGTGGCGTCG GAGGACGAGG GCGCCGCGAG CGCGGGCCCG
TCCGAGATCT TCCAGGACCT CGCCGCGAAG CTCCGGGACC GGAGCGAGCC GCCGCCGCGG
GGGGCCGCCG CCCGCCGCAC CTGGCAGCCC CCCGAGGAGC CGCGCAATCC CCCGCCGCTG
CGCGGCACCG CGCGGGTGGT CGATACCGGC CGCCTCAAGG TCGAGGGCCA GCCGGTGCGG
CTGTTCGGGG TCGAGGGCCA GGGCGGCCGC GCGGCCCGCG AGTTCCGCCA GTACCTGCGC
CAGCGCGACG TCTCGTGCGA GCCGGCGGGC GAGGCGGAGG TCTATCGCTG CCGGGCGGGA
TCGCAGGACC TGTCCGAGGT CGTGCTGTTC AACGGGGCGG GGCGGGCCGC GCCCGGGGCC
ACGCCGGAGC TGCTCGCCGC GGAGGCGAAC GCCAGGGCGC GCAAGGCCGG CATCTGGCAG
GAGTGA
 
Protein sequence
MSPATLSPAT RREGRIDDML AETSTAPERD WLDLGSSPAP APPPPQAPPP GWSARIAGEA 
VRVGQAVAAR WQPALAARVA PLRLAAGRAG ARLAAHPLAR RARSGAGAAA ERLAALRWSR
LALTLGLLLL VGCAALLAVS AATLPRLDGP GPASAPVTVR AEDGEVLATR GSLRGRPLPA
SAIAPAMRRA IIAAQDPWFM DPHRLDAAGV AAVIRGAFRD TISPGPREGS ARLTQRLVRT
QLLGGERGLV RKLQEAMLVL WLQARASPDE IVARFLSGAA FGPDLIGLDA ASERLLGKAP
RDLTTAEAAL LAGLTLPPAD LRPDRDVEAS RARARGVLDA MVMTGAITRL EAEEAGRALA
AIKSPTATAV TRSGVVDLAV LAARDRLGDE VRNASLRISL DRSLQSAAEA AVNKRLDVAA
RNRGDRAGLV VLGPDGAILA AVSGGSPLAA DPAGRAAAEA SLRRVTRDGR PVYDRPQAAT
LDPATVRARA FALLSGLARL PEGVAAAPAA RDGLAVGPAG DVTLGVWVAS EDEGAASAGP
SEIFQDLAAK LRDRSEPPPR GAAARRTWQP PEEPRNPPPL RGTARVVDTG RLKVEGQPVR
LFGVEGQGGR AAREFRQYLR QRDVSCEPAG EAEVYRCRAG SQDLSEVVLF NGAGRAAPGA
TPELLAAEAN ARARKAGIWQ E