Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1932 |
Symbol | |
ID | 5188867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1984431 |
End bp | 1985999 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640591770 |
Product | amidohydrolase 3 |
Protein accession | YP_001272501 |
Protein GI | 148545131 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA CATTTATTAA CGGTAAAATC TTTGTTGGTG ATACTGAGGA TCATTTTGTT AATAGCATGG TAGTTGAAGA TGGAACGGTT AAACGAATTG GTGATAATTT ACCTAATGAA GGCGAAGTGA TTGATCTGCA AGGACAAACA GTTTTGCCAG GATTAATTGA CTGTCATACC CATCCTAAAT ATATCGCTGA TGCCCTCCAT GGTGTTGCTT GTACCCCGCC AAATGTTAAT AGTATCAAGG AAATGCAAGA AGCACTTCGT AACTCTCCTG CATATGGTCA AGGCGAAGAT GGGTGGATTG AAGGTTGGGG TTTTGATGAG ACAAAATTAG CAGAACATCG GAGTCCTAAC CGTGATGATT TAGATGCTGT GTCAACAACG CAACCAATCT TTATTTATCG CTCTGACTGT CATTCTTCTG TCGGCAATTC TAAAGCCTTG GAACTTGCAG GAATTGATGA AAATACGCCT GACCCGGTTG GTGGGAAAAT TGAACGATTT GCTGATGGAC GACCAACTGG TTTTATGCGC GAAGTAGCTG CCTCGCAACT TCTTATTCGG GCTAAATCGG CACAAAGTTA TGAAAATGAC GTAGCTAATA TGGTTAATAG TTCCGAACAC TATCTTAAAG AAGGAATTGT GGCAATTGGT GAAATGATGG GCCGGATGAA GCCATATACT TCTTTAAAAC TATACCAAGA TGCAGTTAAA CAAGGGTTTG GTCCTAAGGC TTCGATCTAC TATGTTTTTG ATGAAATTGA TCCGCAGGTT GGACTGCAAC CAAGCGGGGA TGAAAAACTC CGCGTTGCTG GAATTAAAGT CTTTATGGAT GGGAGTATTT CTGGTGAAAC GGCCTATAAT ACTGATCCTT ATCCATCGGG AAAAATGGGA GTTAGTTTGA CTTCAGTGGA AAAGCTTAAG CGAGCAGTAA AGATGGCTCG TGATAATAAG CTTCAACTAG CTGTGCATGC GATGGGCGAT AAAGCAATTC AAACAGTAAT TGATGTAACA AAAGAGATGG AGCCATGGCT AACAACGATG CCATCAGTAA GAATTGAGCA TGCCTCCTTA ATGACTGATC AAATGTTTGC AAAGATTGCC AATAGTAAAA TGAACTATGC GTTAGTCACG CAACCAATCT TTTTCTTTGC AGAAGATGAA TCCTATCGGC ATTACCTTTC TCCAGCACAG TTTAAATTAG CTTACCGCGT CAAAACAATG TTAAATTCTC AAGCAATGTT AGGTTTGAGT TCGGATGCCC CATGTACGCC ATGGGCAGAA CCTGATAGCC CGTTTTATAG TATTTATGCG GCTGTAACGA GAAAGGCAGC TAATGACGAT ATTGTTAACG CAGAAGAAGC AATTACAGTT CCACAAGCTA TTCTTGGTTA TACTCGGGAT GGTGCTAAGA TTGGCGGCTT TGATGATAAT GGAACGCTTG AAGTAGGAAA GGCAGCGGAC TTTGTTATCT TAAATGATGA TATCTTTACA GTTGCTCATA GTGAACTTAA AAATATTCAC GTGAATGAAA CTTGGATGGC GGGGAAGAGA GTTATGTAG
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Protein sequence | MTQTFINGKI FVGDTEDHFV NSMVVEDGTV KRIGDNLPNE GEVIDLQGQT VLPGLIDCHT HPKYIADALH GVACTPPNVN SIKEMQEALR NSPAYGQGED GWIEGWGFDE TKLAEHRSPN RDDLDAVSTT QPIFIYRSDC HSSVGNSKAL ELAGIDENTP DPVGGKIERF ADGRPTGFMR EVAASQLLIR AKSAQSYEND VANMVNSSEH YLKEGIVAIG EMMGRMKPYT SLKLYQDAVK QGFGPKASIY YVFDEIDPQV GLQPSGDEKL RVAGIKVFMD GSISGETAYN TDPYPSGKMG VSLTSVEKLK RAVKMARDNK LQLAVHAMGD KAIQTVIDVT KEMEPWLTTM PSVRIEHASL MTDQMFAKIA NSKMNYALVT QPIFFFAEDE SYRHYLSPAQ FKLAYRVKTM LNSQAMLGLS SDAPCTPWAE PDSPFYSIYA AVTRKAANDD IVNAEEAITV PQAILGYTRD GAKIGGFDDN GTLEVGKAAD FVILNDDIFT VAHSELKNIH VNETWMAGKR VM
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