Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1256 |
Symbol | |
ID | 5188232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1301342 |
End bp | 1302844 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640591096 |
Product | hypothetical protein |
Protein accession | YP_001271850 |
Protein GI | 148544480 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATT TCATCACTAG CCGGCAAGAT TTACACACCT CGGCCATCGA ACTTGCCCAA GTCAAACGGC TACGAATTTT CGATCATCTA AATGTCCCCG CGATCATTGT CACGATGCTG TATAACTTCG ACCATCAAGC TGTTGAAGAA AAGCTTAAAG TTAAAGGTCG CATCCTTAAC ATCTACCAGT ATTATCAACA GCTTCCTTAT CGTGATGATC CCACAGTTGA TCAAGCCATT ATTAAGCAGG TATTGACTGT CCCTGGCTGC CAAGTTAAGG ACAATTGTGC CCTACGCAAT GGCAAAGTGC GGGTCCGCGT GAACTTCCGC AACGGACGGT TATACTATAT CGACTACCTT GATCAGTACG GCTTTACCAA TCGACGGGAC TTTTACGATC AAGGATGGCG GACATATACT GACTATTTTG AAGATAAGGG ACGGTTAATT GCCCGCCAGT ATTACAATCA TGATGGACAA GTAAAGATAA TCTATCATTA TCGTGGTGGC GAAGGTAATG TCCCCATTCT TACCCTCATC CAGCTAGTTG ATCAAGGGCA TGAATGGCAA TTTGATAATA AAATCGAATT TCGGGCGCAC TTTTTAGATG AGCTTGTTGG AGATGATCCC CAATCAATCC TTATCAGCGA TCGTTCTAAT ATCGCGCTAA AGGCGTTTAC GCTAATGAAA AAGCCGGCCA GACGGTATCA GGTATTCCAC TCGGCCTTTA CCGACGATGG TCAAAGCAAC GGCCCCATTT CGGCAATCTA CCAGCCAATC GCAACAATGC TCGCAAAAGG ACAGCTAAGC GGGCTGATCT CTGCCACGCA ACGGGAAGCT CAAGACGCTG CGAAACGGTT CCAAACTAAC CAGAGCTATG GCATCCCCGT GACTTATTTG ACGGGTGCAG AGCTCACAAA AGAAATCCCC GTTAGCCAAC GCCAGACAGG AAAATTCATT GCGGTTGCCC GGCTTTCCAA AATCAAACAA CTTGATCATA TTATCAATGC GATAATTCGT CTCCACCAAG ACTTTCCGCA AGTAACCCTT GATATTTATG GTTATAGCGA TAGTTGGAAT AAAAACCAAA CCGCTAATGC TCTGAAGTCA TTGGTAAAGG AAAATAAAGC CGAGAGCTAT ATTAATTTCG TTGGTTATTG TGATGACCTT AGTGCTGCCT ATGAACATGC TCAAGCAGAA ATTCTAACGA GCTATTACGA AGGCTTTGCA ATGGCAGTCC TAGAAGCACA GGGTCATGGT TGCCCAGTTG TTAGCTATGA CATCAATTAT GGACCAGCAG ATATAATTGA TGACCAGCAG AGTGGTAAAC TGATTCCGCC GAATGATCAA GAGGCCCTGT ATCAACAACT GCGAAAACTA TTAGCAGATC CCGCCCTCGC AAAAAAGTAC GCCCACCATG CACAAAAAGC GGCCCAAAAA TACAACTTTG ATCATGTCGC CGAAAAGTGG CAAAAGTTAA TTAATCGAGT AGGAGATAAT TGA
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Protein sequence | MNYFITSRQD LHTSAIELAQ VKRLRIFDHL NVPAIIVTML YNFDHQAVEE KLKVKGRILN IYQYYQQLPY RDDPTVDQAI IKQVLTVPGC QVKDNCALRN GKVRVRVNFR NGRLYYIDYL DQYGFTNRRD FYDQGWRTYT DYFEDKGRLI ARQYYNHDGQ VKIIYHYRGG EGNVPILTLI QLVDQGHEWQ FDNKIEFRAH FLDELVGDDP QSILISDRSN IALKAFTLMK KPARRYQVFH SAFTDDGQSN GPISAIYQPI ATMLAKGQLS GLISATQREA QDAAKRFQTN QSYGIPVTYL TGAELTKEIP VSQRQTGKFI AVARLSKIKQ LDHIINAIIR LHQDFPQVTL DIYGYSDSWN KNQTANALKS LVKENKAESY INFVGYCDDL SAAYEHAQAE ILTSYYEGFA MAVLEAQGHG CPVVSYDINY GPADIIDDQQ SGKLIPPNDQ EALYQQLRKL LADPALAKKY AHHAQKAAQK YNFDHVAEKW QKLINRVGDN
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