| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0757 |
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| Symbol | |
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| ID | 5188878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 829501 |
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| End bp | 830217 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640590590 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_001271358 |
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| Protein GI | 148543988 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000912353 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGAT TACAAAAGGC AATGGCGGAA GCAGGAGTAG CTTCTCGTCG GGCATCAGAA
AAACTTATCC TTCAAGGGAA AGTTGCAGTT AATGGCAAGA TTGTGACTGA ACTTGGGACT
AAAGTTGGTG TTCATGATGA GATTGTAGTA AATGGGGTTC CAATCCATCA TGAACAACAC
GTTTACTACT TGCTAAATAA ACCGCGGGGT GTTATCTCAA GTGCTCATGA TGATAAGGGG
CGGCGAACAG TCGTTGACAT TATTCATGAT GCTGATATTG ATGAACGCAT TTATCCAGTT
GGTCGATTAG ACTATGACAC AACCGGGATT CTTCTCCTAA CAAATGATGG TACTTTGGCA
AATAAACTGA TGCATCCTAA ATATGAAGTT GAAAAAACTT ATGTTGCTAA GGTTGAAGGA
ATCGTCAAAA ATGATGAGTT AAAACAATTA CGTTTAGGGG TGATCATCGA TGGCCGAAAG
ACAAAACCGG CTAAATCGAA GCTCCTGAAT GTTGACCGTG CCAAGAAGAC AAGTCTTGTT
CAATTAACAA TCCATGAAGG ACGAAACCAC CAAGTTAAGA ATATGTTTAA GGCAGTAGGA
CATCCGGTGA CTAAACTTCA TCGTGAAACA TATGGACCAT TAAATTTGTA TGGTCTTCAG
CCGGGTGAAT TCCGTGCATT AAAGCCTGAA GAAGTGCAGT TATTAAAGAA AAAGTAA
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| Protein sequence | MERLQKAMAE AGVASRRASE KLILQGKVAV NGKIVTELGT KVGVHDEIVV NGVPIHHEQH
VYYLLNKPRG VISSAHDDKG RRTVVDIIHD ADIDERIYPV GRLDYDTTGI LLLTNDGTLA
NKLMHPKYEV EKTYVAKVEG IVKNDELKQL RLGVIIDGRK TKPAKSKLLN VDRAKKTSLV
QLTIHEGRNH QVKNMFKAVG HPVTKLHRET YGPLNLYGLQ PGEFRALKPE EVQLLKKK
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