Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0553 |
Symbol | |
ID | 5188976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 614539 |
End bp | 615516 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590360 |
Product | type II secretion system protein E |
Protein accession | YP_001271158 |
Protein GI | 148543788 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGTT TTGAAGAAGA ATTAACAAGA ATAATTCGCA AGCAACCGAG TGACCTGTAC ATCTTACCTC ATGATAGGTA TTATCAATTA TCCTTAGCGA TAAAGGGGAC CCTATTTCCT TTTAAACAGG TTACGCGTGA TTATGGTCAA CGTTTTATCT CATACTTAAA ATATTGCGCC AATATGGCAG TTAGTGAGCA TCGACGACCC CAGCTAGGCG CTTTTAAATT TACTTATGCT CACCAAAAGA TCAATTTACG CTTATCAAGT GTTGGTGATT ATCAAGGGAG GGAATCATTA GTTATTCGCT TTATATATCC CCTTAATGAT ATTAGGTTTA ATTTTTTAGT TCCTCACCAG TGGGAAATAT TACAGAAGTA CCGTCAACAA AGAGGTTTGA TTCTTTTTGC CGGGCCAATG GGGGCTGGTA AAACAACTAC CATGTATCAG CTTGCTCGAC AGTTATTACC GAAACAAATT GTATTAACAA TTGAGGATCC CGTAGAAATT GACCATCCGG GATTTATTCA ATTGCAAGTA AATGAATTAG CGGGGATGGA CTATGAAAGT TTATTAAAAT TGGGATTACG GCATCGCCCA GATGTGTTTA TCATTGGAGA AATCCGTGAT TCACAGACAG CTGCTATGTC AGTTCAAGCC GCATTAAGTG GTCACTTAGT TTTGGGAACT ATCCATGCTC GAAATGCTTA TGGCGTTGTT TCTCGTCTTC AACAATTAGG GATAGATTCT TATTATCTTC AGCAAGTATT AACGGCGGTA TCTTATCAGC GTTTAATTCC GTTGGTGAAT GGAGAACAAG CCATCTTATG TGACCTGTTA AATCGACATC AATTTAGTGA TTTGCTCAAT GGCACCAAGA AAGGAGGAAT GTCTAATGAA TGGTCAAAAG CTCTTCAGCA GGCTGTGGAA AATGGAGAAA TTACGGAGAA TACTGCACGT CAATACCAAC AAGGTTAA
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Protein sequence | MPSFEEELTR IIRKQPSDLY ILPHDRYYQL SLAIKGTLFP FKQVTRDYGQ RFISYLKYCA NMAVSEHRRP QLGAFKFTYA HQKINLRLSS VGDYQGRESL VIRFIYPLND IRFNFLVPHQ WEILQKYRQQ RGLILFAGPM GAGKTTTMYQ LARQLLPKQI VLTIEDPVEI DHPGFIQLQV NELAGMDYES LLKLGLRHRP DVFIIGEIRD SQTAAMSVQA ALSGHLVLGT IHARNAYGVV SRLQQLGIDS YYLQQVLTAV SYQRLIPLVN GEQAILCDLL NRHQFSDLLN GTKKGGMSNE WSKALQQAVE NGEITENTAR QYQQG
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