| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1619 |
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| Symbol | |
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| ID | 6877598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1582197 |
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| End bp | 1583480 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789485 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002220048 |
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| Protein GI | 198283727 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.891221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000204841 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATACGA CTATTCGTGG TTGTTTGACC CCACCTGCGT GGGGCGGAAT TTGCTTCCTG
GCCGGAGTGC TATTGCTCCT GTCGACGACG CATGCCAGTG CCGCGCCGTT GAGCCTGCAG
GATGCGGAGG CGATTGCCCT GGGGAAAAAT CCCGGTCTTG GCGCCATAAA GCAGAAGGTT
GTGGAATTAC GGCACCAGGC GGTAGCGGTA GCCCAACTAC CCGATCCGCA TCTCGATCTC
GGCGCTGCGA ACCTACCCCT CAACAGCTTC TCCATGAACC AGCAGCAGAT GAGCATGCTG
AGCGTGGGTC TGAGTCAGAC TTTTCCCTCT TTTGGCAAAC TGGGACTGAA AGGACAACAG
GCGGGGGTCG AGGCCCAGGC GGCCGCCGAT ACCCTGCGCG GCCAGTCGGC CGAATTGGTG
TTGTTACTGC GCCGCGCCTG GCTGCAAGCC CTCTATGCCG AAGATGCCGA GGCAACGATC
CGGCATCAGG AACAGTTACA GGCAGAGAGC GTACAGGCGG CGCTGGCGCT CTATCGGTCC
GCTCAAGGGT CCCAGGCCGA TGTGCTCCGA GCCCAACTGG CGCGTGACAG CCTGGCCAAT
GATATCAGCA AGTTGCAAGC GGAGCGGGCG AGCGATCTGG CGCAAATCGC GCAGATCCTG
AACCTCCCGA AACCGCCATC CATAGAGCAT CAATGGCCGA ACCTGTCGCC GCCGATTACC
TTGGTTCAGG CGGAAGCCCG CCTCTCCGGC CAACCCCTCC TGCGTGCCGC CCAGGCGCAA
ACCCGCGCGG CGCAAGTGGG CGTAAAGGTG GCCAAACGTG GCTATTGGCC GGAAGTCACG
GTCAGCGTCG ATTATGGTCA GGATTTCTAC CCCGGCAGTC CCAACTGGCT GTCAGCGGGG
GTTGACCTGA GCCTACCCAT ATTTCCGGGA AACCGCCAGG ACCAGGACGT TGCCGCCGCC
CGGGCCAGGG CCCTGCGGGC GCAATATCGC TACGACGATC AGCATCTGGC CATGATCCAA
CAGGTGCGCG CCAACTTTGC CCGTTATGTG GCACTCAAGA CCGAGCTGGA GCGTACTGAT
CAACGCCTGC TGCCCACCGC ACGAAACGCC TTTTCCGCAA CACTCGCGGC CTACGCCGTA
GGACGTGCCG AACTGAGCGC GGTGCTGCGT ACCCAGAAGG AGGTGCTGGA CTACGCCCTC
AGCCGCCTGC AATACCGCCG CGATCTGGCC CTCAGCGCCG CAGAACTGGA TTTCCTCACC
ACCGAAGGGG GGGCACGACC ATGA
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| Protein sequence | MYTTIRGCLT PPAWGGICFL AGVLLLLSTT HASAAPLSLQ DAEAIALGKN PGLGAIKQKV
VELRHQAVAV AQLPDPHLDL GAANLPLNSF SMNQQQMSML SVGLSQTFPS FGKLGLKGQQ
AGVEAQAAAD TLRGQSAELV LLLRRAWLQA LYAEDAEATI RHQEQLQAES VQAALALYRS
AQGSQADVLR AQLARDSLAN DISKLQAERA SDLAQIAQIL NLPKPPSIEH QWPNLSPPIT
LVQAEARLSG QPLLRAAQAQ TRAAQVGVKV AKRGYWPEVT VSVDYGQDFY PGSPNWLSAG
VDLSLPIFPG NRQDQDVAAA RARALRAQYR YDDQHLAMIQ QVRANFARYV ALKTELERTD
QRLLPTARNA FSATLAAYAV GRAELSAVLR TQKEVLDYAL SRLQYRRDLA LSAAELDFLT
TEGGARP
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