Gene Lferr_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1352 
Symbol 
ID6877326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1305628 
End bp1306476 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content55% 
IMG OID642789225 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_002219792 
Protein GI198283471 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC ATGGCGAATT AGATAGTTGC ATCGGCTGGT CAGCAGCGAC TTTGCTGACC 
GGAAAAGGGT TATCGGTTGC CCACCAGGAA GCTGTCCTTG AAGAACGGGC AGTATCCATT
GTCATCAACG GTCAGGCTTA TGCGGTGATG ATGGTGACGC CGGAGCATCT GGATGATTTC
TTTATGGGTT TTCTGTGGAG CGAAGCCATT ATTCACGGCC CCGAGGAAAT TATCGCCTGG
GAACGGATGA CCGAAAATGG CGCCTGGGCC ATCTACCTCC AGCTCACGGC AGCAGCTGCA
GAACGCGCGC AACACAAGCG TCGTCACGTC CTTGGCGGAA GTGCCTGCGG CTTGTGCGGG
ACACCACTCC TGGCCGGGCT CATTCCCTTT GCGCCACTGG AAAGCAGTTT TTGCTGCAAT
CCGGCCTCCA TCCGCACTCT CATGGTCCAG ATGCAGGAGC GACAGGCGCT CAACCACAGT
ACCGGGACAG CCCATGCAGC CATTCTCGGC TATCAACGGG ATTATCTGGT GCGCGAAGAT
ATTGGTCGCC ACAATGCGGT GGATAAAAGT ATTGGTGCAG CCATTCAGCA TGGGCTGAGG
CCCGGCGAAG TCAATGTGCT GGGGATTTCC TCGCGCCTGA GTTTTGAAAT CGTCCTCAAA
GCCATTGGCT TTGGTATTCC GGTGATTGCG GCTATTTCCG GGGTCAGCAG TCTCGCTATC
AAGCTGGCTG AAAGCCATGG TGTTACCCTG ATTGGTTTCG CCCGGAATGA TCGCATGACT
TTGTATGCCC ACCCCGAACG CATCCAGAAA GACTGGGTGC CCGCACTTTC CCCGGTTTGT
GATTATTAA
 
Protein sequence
MRIHGELDSC IGWSAATLLT GKGLSVAHQE AVLEERAVSI VINGQAYAVM MVTPEHLDDF 
FMGFLWSEAI IHGPEEIIAW ERMTENGAWA IYLQLTAAAA ERAQHKRRHV LGGSACGLCG
TPLLAGLIPF APLESSFCCN PASIRTLMVQ MQERQALNHS TGTAHAAILG YQRDYLVRED
IGRHNAVDKS IGAAIQHGLR PGEVNVLGIS SRLSFEIVLK AIGFGIPVIA AISGVSSLAI
KLAESHGVTL IGFARNDRMT LYAHPERIQK DWVPALSPVC DY