Gene Lferr_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1026 
Symbol 
ID6876995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp995875 
End bp996180 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content52% 
IMG OID642788904 
Productintegration host factor, beta subunit 
Protein accessionYP_002219475 
Protein GI198283154 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00129538 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000260989 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTAAAT CAGAATTGAT CAAAAACATC AGCGCACAAT ATCCGCACTT GAGTGTTCGT 
GATATTGAAA TGGCTACCCG TCAGATGCTC GATTATCTGA GCGACGCGCT GGCTGAAGGG
GAACGTATTG AAATTCGTGG TTTCGGAAGT TTTTCCATGC ATGTGCGCCC TGCCAAGCAG
GGGCGTAATC CGAAAACGGG AGAGCCGGTT CTGGTGCCTG AAAAGCGGGT TCCGCATTTC
AAGCCGGGCA AGGAGCTCCG TGAGCAGGTT GATTACCCGG AAGCGGTTGC GGGTGGCAAG
GCTTAA
 
Protein sequence
MTKSELIKNI SAQYPHLSVR DIEMATRQML DYLSDALAEG ERIEIRGFGS FSMHVRPAKQ 
GRNPKTGEPV LVPEKRVPHF KPGKELREQV DYPEAVAGGK A