Gene Lferr_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0325 
Symbol 
ID6876276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp308286 
End bp308813 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID642788198 
Productputative integrase 
Protein accessionYP_002218786 
Protein GI198282465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0523813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAGG GCGAAGAGGG GTTGACCCTG GGTGCCCTGA ACCGGGCGAC GCAGGCCTGG 
GTAGAGCGGG AGTATCATCG TGCCCGCCAT AGCGAGATCG GCACTACCCC GCTGGCCTGC
TATCTGGAGG GTCACAGTGT CGCCCGGGAA TGCCCTTCCG TCACCGAGTT GTCCCGTGCC
TTCCGCATCG AAGTCCGGCG GCGGCAACGG CGCTCGGACG GCACGGTGAG TCTGGAGGGC
AAGCGCTTCG AGATTCCTGC CCGCTACCGC ACCCTCCCGG AGGTCACCCT GCGCTATGCC
CGCTGGGATC TGACCCAGGT CGATCTGGTG GAACCGCGCA CGGGTACGGT CCTCTGCCCG
ATCCACCCGC TGGATAAAAC CGCCCATGCC GACGGGGCGC GCCGAACCCT GAACCCGACA
CCGGACCTCA GCCCCTTGCC GGCCACCGGT ATGGCCCCGC TGATGCGTCA ACTACTCGCC
GAATATGCCG CCACCGGCGT TCCCGCCCGC TATCTGCCCA AGGAGTAA
 
Protein sequence
MLEGEEGLTL GALNRATQAW VEREYHRARH SEIGTTPLAC YLEGHSVARE CPSVTELSRA 
FRIEVRRRQR RSDGTVSLEG KRFEIPARYR TLPEVTLRYA RWDLTQVDLV EPRTGTVLCP
IHPLDKTAHA DGARRTLNPT PDLSPLPATG MAPLMRQLLA EYAATGVPAR YLPKE