| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0251 |
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| Symbol | |
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| ID | 6876201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 238449 |
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| End bp | 240140 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788127 |
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| Product | P-type conjugative transfer protein TrbL |
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| Protein accession | YP_002218716 |
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| Protein GI | 198282395 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGGAC ACCGCAGGTT TCCGTGGGTC GTGGGCATGT TTCTGGGTGC CGTCCCCGCC
ATATCATTCG CAGCGGGTTC GGGATCGTTG AGTCAGGTAC AAAGCCTTTT GCGAGGCAAA
ATTCTTCCCT GGCAAAGTGT CATGCAAACG GCGGCCACGG ATCTGTTCTA CGTCCTGGCG
GCGGTCGAGT TCTCCGTCCT CTTTTTGAAC CATGTTCTGC AAAAGCGTGG GCACGAAGAT
CTCTTTGCCG GTATCATCAA GAAGGTGGTG ACGCTGGGTT TTTTTCTGAC CCTGCTGGAC
AACTCCGGGA CCTGGATTCC CGACATCATC AATGGTCTGG CCGGTGGAGC GCACGCGCTT
GGAGTGACGG CTGTGACGCC CGGGCAGATC GCGACGGAGG CTCTTCAGGC ATTTCTCGGG
ATCGTGCTGT CTCCAATAGC TGCCGCCACC CACAACGCGA GCAATACCTT CAGCGACATT
TTCAGTGGTA ACTTCTCTGC GGCTTTCTCT TATGCGGCCA AAACGGTCGC CAGCAGCAAT
CCGGCATCGC TCCTGGTAGA GACCCTCCTG GCGGGGATCA TTGGTCTGCT GGCGGGGATG
GGTATTCTGG TCATGGCCCT GGAGTTCCTG ATGGTCCAGA TCGAGAGCTA CCTAGTGATC
GCCCTGGGCG TGATCATGCT GGCCGGCGGC GGGTTGCGCT GGACGGCAAA GTATGTCGGC
AGTTACTTCG ATTACGCCAT CAACGTGGGT GTCCGTCTTT TTGTCCTGAC CGCGCTGGCG
TATCTGGTGA CCTACAGCAT CGTGCCGCTG ATCCAGACGA TCCTGGAGAA CGTCACCAAT
CCCCTACAGG CGGGATTTGA GGTGCTCATC TTGGGCGCCG TCATCGCGCT GCTTCCCCGC
AAGGCGTCCA GCATAGCGAG CAGTCTTCTG AGCGGTAACT CATCCTTCTC CGGCGGAGAA
CTGGTCAAGG AAGGCGGGAT GATCGCCGGT GGCACGGTAG CGGCAGGAGC TGCTGGCGTG
GGCCTGGCCG CCGCTGCGGG CGGGGGGCTC GCCGCTGGTG GACTATCCGC AGCGGCGGGT
GCTGGAGGCG GTGCGGCCGG AGGTGCTGGC AGCCTCGCAG GCGGCGGCCT TGCCGGAGCG
GCGGGCGCGG GAGAAGCCGG CGCTGCGGCT GGTGTGGCGG CCCCGGAAGC TGGGGCGATG
TCCGCAGGCG GTGGCGCGAG TTCCGGCGCG GGTGCGGGGA ACGCCGTACC GGCCCCCAGC
GCTGGCGGTT CGGCGGGTGG TGAGGCTCCA CAGGCAGCCA GGGCTGTGCA GGCTCCAGCG
ACCAGCACGC AATCCACTGG TCAGCAAAAC CCATCCAAGG GTGTCGAGGC ACCGACCCAG
GAAGCTGGAA AGGAAGCTGG CCAGGATAAG CGGAACGATC AGGAAATGAG CGCAAGCGAA
CCCTTCGCAG GGGGCGAACC CCATCCCGAC GCGCCGCCCG CTCCGGTCAA TGCCGTCCCC
GCTCCTGATC CCGTCAGTAC GCCTTCTGGC GGTGGCAATC AGGGAAGCAC GGCGGCTCCG
GCTCCGAAGT CGGCAGTGGA CAAGCTGACA GATAGCTTTG TGAATCATGC GAAGGATATC
GCGATAAACC AGTCAAAAGA GAAGGTGGGG GTGAACAAGC TCGACGTTGG GCATATGAGG
GACTTCGACT GA
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| Protein sequence | MRGHRRFPWV VGMFLGAVPA ISFAAGSGSL SQVQSLLRGK ILPWQSVMQT AATDLFYVLA
AVEFSVLFLN HVLQKRGHED LFAGIIKKVV TLGFFLTLLD NSGTWIPDII NGLAGGAHAL
GVTAVTPGQI ATEALQAFLG IVLSPIAAAT HNASNTFSDI FSGNFSAAFS YAAKTVASSN
PASLLVETLL AGIIGLLAGM GILVMALEFL MVQIESYLVI ALGVIMLAGG GLRWTAKYVG
SYFDYAINVG VRLFVLTALA YLVTYSIVPL IQTILENVTN PLQAGFEVLI LGAVIALLPR
KASSIASSLL SGNSSFSGGE LVKEGGMIAG GTVAAGAAGV GLAAAAGGGL AAGGLSAAAG
AGGGAAGGAG SLAGGGLAGA AGAGEAGAAA GVAAPEAGAM SAGGGASSGA GAGNAVPAPS
AGGSAGGEAP QAARAVQAPA TSTQSTGQQN PSKGVEAPTQ EAGKEAGQDK RNDQEMSASE
PFAGGEPHPD APPAPVNAVP APDPVSTPSG GGNQGSTAAP APKSAVDKLT DSFVNHAKDI
AINQSKEKVG VNKLDVGHMR DFD
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