Gene Lferr_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0113 
Symbol 
ID6876063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp108222 
End bp108758 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content66% 
IMG OID642787992 
Productprotein of unknown function DUF924 
Protein accessionYP_002218581 
Protein GI198282260 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCG ATGTCCTCGA CTTCTGGTTT CACGAGATCG CGCCGGCGCA GTGGTGGGCG 
GCCGATCCGG CGTTCGACGC GCTGATCCGC AGCCGCTTTG GCGCGCTGCA TGCGCAGGCG
GTGCGCTGCG AACTGTACGG CTGGCGTGAC CGGCCCGAGG GGCGGCTGGC GGAAATCATC
GTGCTCGACC AGTTCTCGCG GAACATGTTC CGCGGCGATC CGCGCGCCTT TGCCGCCGAC
ACCCTGGCTC TCGCGCTGGC GCAGGAGGCG GTGGCCCGCG GTGCCGATCG GGCGCTGGCG
GCCGAACAGC GCAACTTCGT CTACATGCCC TATATGCACA GCGAATCGCC GGCGATTCAC
GTCGTCGCCG AGCAACTGTT CAAGGCCAAC GGCCTGGCGG ACAACTACGA CTACGAACTG
CGGCACAAGG CCATCGTCGA CCGCTTCGGG CGCTACCCGC ACCGCAACGC CATTCTCGGC
CGCGAATCGA CCGACGAGGA ACTTGCCTTT CTCGACCAAC CGGGGTCGAG CTTCTAA
 
Protein sequence
MFSDVLDFWF HEIAPAQWWA ADPAFDALIR SRFGALHAQA VRCELYGWRD RPEGRLAEII 
VLDQFSRNMF RGDPRAFAAD TLALALAQEA VARGADRALA AEQRNFVYMP YMHSESPAIH
VVAEQLFKAN GLADNYDYEL RHKAIVDRFG RYPHRNAILG RESTDEELAF LDQPGSSF