| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3887 |
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| Symbol | |
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| ID | 6162337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4360643 |
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| End bp | 4361437 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641666665 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792906 |
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| Protein GI | 171060557 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGCG GGCGATCCGG CGCCGGCCTG TGCGTCGGCC TGAGCAGGCC GCAGCGCGGC
GTCACCTACC TCGCGCTGCT GCTGGCCGCG GCGATCACCA GCGCGGCGAT GGCCGCCGGC
ATGACGGTCT GGAGCCAGAC CCAGCGGCGC GAACGCGAGA CCCAGCTGCT GTGGGCGGGC
GGCCAGATCC GCCAGGCGAT CGCCGCCTAC GCGCGCACGG CCAGCGACGT CGGGAACCGC
TACCCGCGCA CGCTCGAAGA CCTGCTGCTC GACCCGCGCA GCCCGGCGCC GCGCCGCCAC
CTGCGCCGGA TCTACGACGA TCCGATGACC CGCAGCACCG AGTGGGGGCT GGTGCGCAAC
GCGCAGGGCC GCATCGTCGG CGTCTACAGC CGCGCCGAGG GCCGGCCGCT CAAGACCGGG
CGCTTCGCCG CCGCCGACAG CGCCTTCGAG CAGGCCCGCA GCTACGCCGA CTGGCGCTTC
ACCGCCGTGC CGGACAACGG CCTGCTCGAT CCGCCGCCGG CCCATCCGGA CGGCCAGGAG
CCGGTCGACG TGGCGCCAGC CGTGATCGCG GATCCGGCCG ATGAGCCGGC GAGCATCCCG
GCGTCGACAC CGGCAACGGC GGCGCCCGCC GTGCGCCCGC CGGCATCCGC CCCCCTGCCC
GCGGCCGAGC CGGTGCAGGA GCCTGAGCCC GAACCCGAAC CGCAACCCGT GCACGAAACC
GATCCGGCCG ACGAGCCGGG CACGGTGATC GAGGAAGCCC CCGCCGTCGA CAACCCCGAG
CGAGACACCG ACTGA
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| Protein sequence | MVSGRSGAGL CVGLSRPQRG VTYLALLLAA AITSAAMAAG MTVWSQTQRR ERETQLLWAG
GQIRQAIAAY ARTASDVGNR YPRTLEDLLL DPRSPAPRRH LRRIYDDPMT RSTEWGLVRN
AQGRIVGVYS RAEGRPLKTG RFAAADSAFE QARSYADWRF TAVPDNGLLD PPPAHPDGQE
PVDVAPAVIA DPADEPASIP ASTPATAAPA VRPPASAPLP AAEPVQEPEP EPEPQPVHET
DPADEPGTVI EEAPAVDNPE RDTD
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