| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3828 |
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| Symbol | |
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| ID | 6161892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4290599 |
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| End bp | 4291516 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666601 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001792847 |
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| Protein GI | 171060498 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.47985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CCTCCTCCGC TGCCGGCCAC GTCTCCTCGC ACTGGCGGCA ATACGTCGCG
CTGACCAAAC CGCGGGTCGT GCAGCTGATC GTCTTCTGCG CCGCCATCGG CATGCTGCTG
GCCGTGCCCG GTGCGCCCGG CCTGGCCGAT CTGGGCAAGG CGCTGTGGGC GACGCTCGGC
ATCTGGCTGG TCGCCAGCGC CGCGGCGGCC TTCAACTGCC TGATCGAGCA GCAGATCGAT
TCCCGCATGA AACGCACCGC CTGGCGCCCG ACCGCCCGCG GCGAACTCAG CCGCACGCAG
GCGCTGATCT TCTCGGCCGT GCTGTGCAGC GCCGGCATGG CGGTGCTGCA CGAGGCGGTC
AATCCGCTGA CGGCGTGGCT GACGCTGGGC ACCTTCGTCG GCTACGCGGT GATCTACACC
GTGGTGCTCA AGCCGCTGAC GCCGCAGAAC ATCGTCATCG GCGGCATCTC GGGCGCGATG
CCGCCGCTGC TGGGCTGGGC CGCGATGACC GGCGAGGTCG GCCCCGAGGG GCTGATCCTG
TGCCTGATCA TCTTCCTGTG GACACCGCCG CATTTCTGGG CGCTGGCGCT CTACCGCGCC
GAGGACTACG CGCGCGCCGG CCTGCCGATG CTGCCGGTCA CGCACGGCAA CGAGTTCACG
CGGCTGCAGA TCCTGCTCTA CACCTTCGTG CTGCTGGCCG GCACGCTGCT GCCCTTCGTG
CAGGGCATGA GCGGCTGGCT CTACCTGGCG GCCGCCTTCG TGCTGGGCCT GCGTTTCATC
CACTACGCCT GGCGGCTGTG GCGCAACTAC AGCGAAGCAC TGGCGCGCCA GACCTTCCGG
TTCTCGATCT GGCACCTGTC GCTGCTGTTC GCTGCGCTGC TGGTCGACCA CTACACCCAG
GATCTGCTGA CGTTATGA
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| Protein sequence | MNAPSSAAGH VSSHWRQYVA LTKPRVVQLI VFCAAIGMLL AVPGAPGLAD LGKALWATLG
IWLVASAAAA FNCLIEQQID SRMKRTAWRP TARGELSRTQ ALIFSAVLCS AGMAVLHEAV
NPLTAWLTLG TFVGYAVIYT VVLKPLTPQN IVIGGISGAM PPLLGWAAMT GEVGPEGLIL
CLIIFLWTPP HFWALALYRA EDYARAGLPM LPVTHGNEFT RLQILLYTFV LLAGTLLPFV
QGMSGWLYLA AAFVLGLRFI HYAWRLWRNY SEALARQTFR FSIWHLSLLF AALLVDHYTQ
DLLTL
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