| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3667 |
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| Symbol | |
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| ID | 6160317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4099601 |
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| End bp | 4100947 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666440 |
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| Product | IPT/TIG domain-containing protein |
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| Protein accession | YP_001792686 |
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| Protein GI | 171060337 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGC GCATGAAGCC GCTGGCGCTC GCGTTGGCGC TGGCCAGTGC CGCCGCCTCG
AGCCCGATGG CACAGACGCT GTGCCGCCCC GACAACACGA CGCCGTTCAC CGCCGGCCCG
GTCGATCCGG TGCACGGTTT CGCGAACACG GTGACCGATT CGGAAGGCGT CTCGCTGGTG
ATCTGCACCG ACAGCGTCGA CGGCCTGGGC AACCCGCCGC CCTGCTTCTT CGACCCGGTG
GTGGCCGGCA ATGCGCAGTC CGAGGCCTCC GGCTTCGGCG GCGAGGGTTT CTGGTTCCTG
GCCGACAACC AGATCGCCAC CACCGGCGCC GCCGCGATCG ACGCGCTGGT CGTGATGGCC
ACCGAAGCGG CCTACCTGAC CGAGATCCCG GCCGCCGGCG AGCAGTTCTC GTTCACCCGC
CTGCGCGTGC GCATCGACGT CACCGTGCCC GGCATCTACA CCGTGCAGTA CCCGTGGGGC
GAGAAGCGCT ACACCGTCAA CGCGGTGGTC GACGACCGCA ACCGCCCGCT GTCGCGCGAG
GTCAACGACA CCACCGACAT CGAGTTCACG CCCAACGGCG CGCGCACCGG CAGCGTCGGC
CCCTGGCTGC GCTGGGATCC GGCGGCGGCC CCGGCCGCGC CGGCCGGCTA CATCGGCGAC
GGCGCCACGC TGCACCGCGT GGTCGGCAGC CCGTGCGGGC GCAACTTCGT GCGCATCAGC
GCCACCACGC TCAACGGCAC CACGCCGCTG GCGATCGACC CGACCGACGC CGACGGCGAC
GGCAGCACCA GCGTGATCAG CAACCCGCTG TTCACCGTGA TGGGCAAGCT CGCCCCGCAA
GGCATCACGC CGCTGACGGT CACGGGCGCC TACTACAGCC GCAGCGCCGG CCAGTCGATC
AGCCTGTTCG CGACCGCACC GAGCACCGCC ACCGTCACCG CCACCCCGGG CGGCACGCTG
GCCAGCGACG GCACCGGCCG CTTCTTCGTC CACACCGCGC TGGCCAGCGT GCCGGCCACG
GTGGCGTTCA ACGCCAGCAA CGCCGCGCAG GGCAACGGCC CGGCGCCGAC GCAGAACGTG
CCGATCACCG ACCTCGTGAC GGTCGGCAGC GCCAGCGCGG TCTGCAGCGG CACGCCGCGC
AGCTGCACGC TGAGCGTGAG CGCCACGTCC AGCGACCAGG CCGCAACCGG CGCGCCGACG
CTCAGCCTGC TGCTGGGCGG CAGCGCCACC CCGCTGGTCG ACGGCGCCCT GACCCTGTCC
GGCCTGAGCG TGCTGCCGGC GGCCGTGACC ATCCAATCGA GTGCAGGCGG CGTGGGCAGC
AAGCCCCTGA CCGTCGTCAA CCAATGA
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| Protein sequence | MTMRMKPLAL ALALASAAAS SPMAQTLCRP DNTTPFTAGP VDPVHGFANT VTDSEGVSLV
ICTDSVDGLG NPPPCFFDPV VAGNAQSEAS GFGGEGFWFL ADNQIATTGA AAIDALVVMA
TEAAYLTEIP AAGEQFSFTR LRVRIDVTVP GIYTVQYPWG EKRYTVNAVV DDRNRPLSRE
VNDTTDIEFT PNGARTGSVG PWLRWDPAAA PAAPAGYIGD GATLHRVVGS PCGRNFVRIS
ATTLNGTTPL AIDPTDADGD GSTSVISNPL FTVMGKLAPQ GITPLTVTGA YYSRSAGQSI
SLFATAPSTA TVTATPGGTL ASDGTGRFFV HTALASVPAT VAFNASNAAQ GNGPAPTQNV
PITDLVTVGS ASAVCSGTPR SCTLSVSATS SDQAATGAPT LSLLLGGSAT PLVDGALTLS
GLSVLPAAVT IQSSAGGVGS KPLTVVNQ
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