Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3667 |
Symbol | |
ID | 6160317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4099601 |
End bp | 4100947 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641666440 |
Product | IPT/TIG domain-containing protein |
Protein accession | YP_001792686 |
Protein GI | 171060337 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGC GCATGAAGCC GCTGGCGCTC GCGTTGGCGC TGGCCAGTGC CGCCGCCTCG AGCCCGATGG CACAGACGCT GTGCCGCCCC GACAACACGA CGCCGTTCAC CGCCGGCCCG GTCGATCCGG TGCACGGTTT CGCGAACACG GTGACCGATT CGGAAGGCGT CTCGCTGGTG ATCTGCACCG ACAGCGTCGA CGGCCTGGGC AACCCGCCGC CCTGCTTCTT CGACCCGGTG GTGGCCGGCA ATGCGCAGTC CGAGGCCTCC GGCTTCGGCG GCGAGGGTTT CTGGTTCCTG GCCGACAACC AGATCGCCAC CACCGGCGCC GCCGCGATCG ACGCGCTGGT CGTGATGGCC ACCGAAGCGG CCTACCTGAC CGAGATCCCG GCCGCCGGCG AGCAGTTCTC GTTCACCCGC CTGCGCGTGC GCATCGACGT CACCGTGCCC GGCATCTACA CCGTGCAGTA CCCGTGGGGC GAGAAGCGCT ACACCGTCAA CGCGGTGGTC GACGACCGCA ACCGCCCGCT GTCGCGCGAG GTCAACGACA CCACCGACAT CGAGTTCACG CCCAACGGCG CGCGCACCGG CAGCGTCGGC CCCTGGCTGC GCTGGGATCC GGCGGCGGCC CCGGCCGCGC CGGCCGGCTA CATCGGCGAC GGCGCCACGC TGCACCGCGT GGTCGGCAGC CCGTGCGGGC GCAACTTCGT GCGCATCAGC GCCACCACGC TCAACGGCAC CACGCCGCTG GCGATCGACC CGACCGACGC CGACGGCGAC GGCAGCACCA GCGTGATCAG CAACCCGCTG TTCACCGTGA TGGGCAAGCT CGCCCCGCAA GGCATCACGC CGCTGACGGT CACGGGCGCC TACTACAGCC GCAGCGCCGG CCAGTCGATC AGCCTGTTCG CGACCGCACC GAGCACCGCC ACCGTCACCG CCACCCCGGG CGGCACGCTG GCCAGCGACG GCACCGGCCG CTTCTTCGTC CACACCGCGC TGGCCAGCGT GCCGGCCACG GTGGCGTTCA ACGCCAGCAA CGCCGCGCAG GGCAACGGCC CGGCGCCGAC GCAGAACGTG CCGATCACCG ACCTCGTGAC GGTCGGCAGC GCCAGCGCGG TCTGCAGCGG CACGCCGCGC AGCTGCACGC TGAGCGTGAG CGCCACGTCC AGCGACCAGG CCGCAACCGG CGCGCCGACG CTCAGCCTGC TGCTGGGCGG CAGCGCCACC CCGCTGGTCG ACGGCGCCCT GACCCTGTCC GGCCTGAGCG TGCTGCCGGC GGCCGTGACC ATCCAATCGA GTGCAGGCGG CGTGGGCAGC AAGCCCCTGA CCGTCGTCAA CCAATGA
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Protein sequence | MTMRMKPLAL ALALASAAAS SPMAQTLCRP DNTTPFTAGP VDPVHGFANT VTDSEGVSLV ICTDSVDGLG NPPPCFFDPV VAGNAQSEAS GFGGEGFWFL ADNQIATTGA AAIDALVVMA TEAAYLTEIP AAGEQFSFTR LRVRIDVTVP GIYTVQYPWG EKRYTVNAVV DDRNRPLSRE VNDTTDIEFT PNGARTGSVG PWLRWDPAAA PAAPAGYIGD GATLHRVVGS PCGRNFVRIS ATTLNGTTPL AIDPTDADGD GSTSVISNPL FTVMGKLAPQ GITPLTVTGA YYSRSAGQSI SLFATAPSTA TVTATPGGTL ASDGTGRFFV HTALASVPAT VAFNASNAAQ GNGPAPTQNV PITDLVTVGS ASAVCSGTPR SCTLSVSATS SDQAATGAPT LSLLLGGSAT PLVDGALTLS GLSVLPAAVT IQSSAGGVGS KPLTVVNQ
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