Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3476 |
Symbol | |
ID | 6160256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3887942 |
End bp | 3888928 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641666250 |
Product | hypothetical protein |
Protein accession | YP_001792497 |
Protein GI | 171060148 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00459983 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAGC CCGCCGACCT CTTCCGCGCC GCCGTCTTGG CCGAGCTGGG CAACACGCCC GATTACATCG TTCCCGGCGA ATTCCACCGC TTCAGCACCA ACGGCCGCCC GAACAACCGC GACGGCTGGT GCAAGCTGTT CGCCGATGGC TACGGGGGTG CGTTCGGCTG CATGCGACAG GGCTTCACGA GTTCCTGGAG CAACCGCGCC CACCGCTTCA CCAGCCCGAC CGACCGCATC GTGCAGGCCC AGCGCATCGC CCAGGCCCGG CAGGAACAAG CCGAGAACCA GCGCCAGCAG TGGGCGCACA ACGGCGAGCG CAACGCCCGG CTGTGGGCTG CGTGTCGGCC GCTGGTGCCC GGTGATGCCG CGTCGCTGTA CCTGCGCCAC CGCCTGAAGG TGGGCGTACT GCAGGCGCCC GCGGCGCTGC GCTTTCACCC GGGCCTGGAC TACTGGCACG ACGGCCAGAA GATCCGCACC TTCCCCGCCC TGGTGGCCGC CATCACCAGC CCTGCCGGTG AGCTGGTGGC GCTGCATCGC ACCTACCTGA GCCGCGAGGG CCGCAAGGCC GCCGTGCCCA CGGCCAAGAA GCTGACCCGC GCGTCGGGGC CGGTGCTCGG TGGCTGCATC CGCCTGGCCG AACCGACCGA GGCCGGCCTG ATCGGCGTGG CCGAAGGCAT CGAGACCAGC CTGGCCGCCG GCATCGCCGG GCGCCTGCCG GTGGTGGCCG CGTACTCGTG CGGGGCGCTG GCCGCGTGGC AGTGGCCGCA GGGGACACAG ACCATCGCCA TCTGTGCCGA CGCCGACGAA GCCGGGCAGA AGGCCGCCCG CGAGCTGGGT CAACGCGCCC TCGCTGCCGG GATCAAGGTG CACGTCGCCA CGCCATCGGT AGCGGGCCTG GACTGGTGCG ACCTGCTGGC TAGCCGCGAC CTCGACCGCC CGCCCTACAG CCATCCGCAA CAACATCAAG GGGCCGCCCA TGAATGA
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Protein sequence | MSEPADLFRA AVLAELGNTP DYIVPGEFHR FSTNGRPNNR DGWCKLFADG YGGAFGCMRQ GFTSSWSNRA HRFTSPTDRI VQAQRIAQAR QEQAENQRQQ WAHNGERNAR LWAACRPLVP GDAASLYLRH RLKVGVLQAP AALRFHPGLD YWHDGQKIRT FPALVAAITS PAGELVALHR TYLSREGRKA AVPTAKKLTR ASGPVLGGCI RLAEPTEAGL IGVAEGIETS LAAGIAGRLP VVAAYSCGAL AAWQWPQGTQ TIAICADADE AGQKAARELG QRALAAGIKV HVATPSVAGL DWCDLLASRD LDRPPYSHPQ QHQGAAHE
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