| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3454 |
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| Symbol | |
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| ID | 6159871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3856124 |
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| End bp | 3856948 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666229 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792477 |
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| Protein GI | 171060128 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0269965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCA GAACCAAGCT CGCTTGCGCT GTTTCCCTGG CCCTGATCGC TGGCGTCGCC
CAGTCTGCCG ATTGGAGCAA TGCCTCCATC GGCCTGACCT ACGGCACCAA GTTCAAGGAG
CCCGGCAATG CCGCGGAAGT CAAGAAGACC ATCGTGACGC TGCAGTACGT CGGTGGCTTC
AAGTACGGCG TCAATTTCTT CACCCTGGAC ATGCTCAAGT CCGACGTCAA CAACCCGGCG
CGCAACAGCA CGCGCGGCGC CCAGGAGGTC TACGTCGTCT ACAGCAACTC GCTGAGCCTG
GGCAAGCTCG GCGGCAGCCC GGTCAAGTTC GGCCCGGTGC GTGACGTGGC GTGGCAGACC
GGCTTCGACT TCAACTCGAA GAACGACGCC TTCGGGGCCG GCCTGGTCAA GTTCATCGCG
GGCCCGAAGG TCGAGTTCGA CGTGCCGGGA CTGCTGACGC TGGGCCTGCT GTACTACAAG
GAACACAACA ACAACAGCTT CGCCGGCCGG AACGTGCATT TCGACGGCAC GGCCCGGCTG
GCTGCGGTCT GGAACTTCCC GTTCCAGGCC GGCACGCCGG CCGTGTTCAA GGGTTTTGCC
AACTTCACCG GTGCCAAGGG CCTGGACGGC GGCGGTGCCC AGACTTCGCC CGAGACCTGG
CTCGACTCGG CCCTGCTGTG GGACATCGGC TCGGTGGCCG GCACGCCCAA GACCTTCTAC
GCGGGCATCG GCTACCAGTA CATCAAGCAC AAGTTCGGCA ACCGTGCGTC ATTGCCCGGC
ACCAAGGTGT CGGCGCCCGA GTTGAAGTTC GAGGCTCATT TCTGA
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| Protein sequence | MLSRTKLACA VSLALIAGVA QSADWSNASI GLTYGTKFKE PGNAAEVKKT IVTLQYVGGF
KYGVNFFTLD MLKSDVNNPA RNSTRGAQEV YVVYSNSLSL GKLGGSPVKF GPVRDVAWQT
GFDFNSKNDA FGAGLVKFIA GPKVEFDVPG LLTLGLLYYK EHNNNSFAGR NVHFDGTARL
AAVWNFPFQA GTPAVFKGFA NFTGAKGLDG GGAQTSPETW LDSALLWDIG SVAGTPKTFY
AGIGYQYIKH KFGNRASLPG TKVSAPELKF EAHF
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