| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3311 |
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| Symbol | |
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| ID | 6160836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3677172 |
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| End bp | 3678197 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666086 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001792334 |
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| Protein GI | 171059985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCT TCAATCCCGC GGTGGGCGCG CAGTCCATGA CCTACAAGCC GACCAAGCGG
AAGTGGCCGC CCGAGGCCGG CATCTTCCTC GTGCTGATCG GCATCAGCCT GTTCTTCGAG
GCGATCGGCT GGTACCTCAA CGGCCAGAGC TTCCTGATGA ACCCGGAGCG GCTGCAGATC
ATCATCTTGC AGATGTCGGT GATCGGCATC ATCGCGGTGG GGGTCAACAT GGTGATCATC
ACCAGCGGCA TCGACCTGTC GTCGGGCTCG GTGGTGGCGG CGGCCGCGGT GGTGTCGGCC
AGCCTGGCGC AGGTGTCGGA CTTCCCGCGG GCCGTGTTCC CGCAGCTGAC TGACCTGCCG
GCGATCTGGC CGATCCTGGC CGGCGTGACG ATCGGCCTGG TGATCGGCCT GATCAACGGC
TCGCTGATCG CCTTCACCGC CATCCCGCCG TTCATCGCCA CGCTGGGCAC GATGGTGGCC
GCACGCGGCT TCGCCAAGTG GTTCACCGGC GGCATGCCGG TGTCGATGCT CACCGACGAC
TTTGCCTGGA TCGGCTCGGG CGTGATCCCG GTGGTGATCT TCCTGGTGAT CGCGGCGATC
TTCCACGTCG TGCTCGGCTA CACCCGCTTC GGCAAGTTCA CCTATGCGAT CGGCGCGAAT
CGCCAGGCCG CACGGGTGTC GGGCATCAAC GTCAACCGCC ATCTGATCTG GATCTACGCG
CTGGCCGGCC TGCTCAGCGG CATTGCCGGC AGCGTGACCG CGGCGCGGGC GATCTCGGGC
CAGTCGGGCA TGGGCGTGAT GTACGAGCTC GACGCGATCG CCGCGGTGGT GATCGGCGGC
TCGTCGCTGG CCGGCGGCGT GGGCCGCATG ACCGGCACCG TGATCGGCGT GCTGATCCTC
GGCGTCATGA CCTCGGGCTT CACCTTCATC CGCATCGACG CCTACTACCA GGAGATGGTC
AAGGGCGCGA TCATCGTGGT GGCCGTGGTG GCCGACCAGT ACCGCCAGCG CAACCGCCGC
AGCTGA
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| Protein sequence | MSIFNPAVGA QSMTYKPTKR KWPPEAGIFL VLIGISLFFE AIGWYLNGQS FLMNPERLQI
IILQMSVIGI IAVGVNMVII TSGIDLSSGS VVAAAAVVSA SLAQVSDFPR AVFPQLTDLP
AIWPILAGVT IGLVIGLING SLIAFTAIPP FIATLGTMVA ARGFAKWFTG GMPVSMLTDD
FAWIGSGVIP VVIFLVIAAI FHVVLGYTRF GKFTYAIGAN RQAARVSGIN VNRHLIWIYA
LAGLLSGIAG SVTAARAISG QSGMGVMYEL DAIAAVVIGG SSLAGGVGRM TGTVIGVLIL
GVMTSGFTFI RIDAYYQEMV KGAIIVVAVV ADQYRQRNRR S
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