Gene Lcho_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3280 
Symbol 
ID6162584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3641455 
End bp3641715 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content65% 
IMG OID641666055 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001792303 
Protein GI171059954 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00156646 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGACG CAATAGTCGA ACGTCAGGCA ACCGGGCGAC TGCCGGACAT CGACACTCGT 
CGCTGCACGG GCTGCGGTTG GTGCGTCGCC GCGTGCGACG CGCTGCACCT GCTGAGCCTC
GAGACCGTCG GCGGGAAGAA GTCGTCGGTG CTGCACGAAC CGGACCGGTG CACGGGCTGC
AGCGCTTGCG CCGTGAAATG CCCGTTCCAT GTCATCACCA TGAAAAAACC GACCGCAACG
GGACGATTGC CGCAGGACTG A
 
Protein sequence
MADAIVERQA TGRLPDIDTR RCTGCGWCVA ACDALHLLSL ETVGGKKSSV LHEPDRCTGC 
SACAVKCPFH VITMKKPTAT GRLPQD