| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3090 |
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| Symbol | |
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| ID | 6163478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3421601 |
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| End bp | 3422650 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665865 |
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| Product | histidine kinase internal region |
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| Protein accession | YP_001792115 |
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| Protein GI | 171059766 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACC TCCACTCAGA GCCCCCCGCC GACCGTCGCG TTGCGCCTCG TGCCGTGCCG
CGCCAGTCGC GCTCGGCCTT CGACGTCTGC CAGGGCGGCG TGGTGCTGCG TGCGATCCTG
TTCGTGCACG GCGTGGTCGC CTTGGGGCTG GCCTTCGGCA GCGCCGGCTG GCTGGGCTGG
CTGACCGATC TGGGCCTGGC GGTGGCGATC GCCCTGCCGG CCACGCTGCT GTGGCTGGTG
CTGGTGTGCG CGGCGCAGAA GCTGTGGGTC AAGCTGCCAC TGCCCGGCCA GTGGGCGGCG
ATGGCGGGCC TGGGCGCACT CTGTGCGGTG GCGGGCTGGG CGCCGCTGGT CGCGCTGCAT
CTGCTCGAAC CCACCGGCCT GGGCGGCTGG GCGCCGCTGG CCGCCGGGGC TGCGCTGGCG
GCGGCGATCT TTCACTGGCT GCAGCAGCGC ATGCGGCTGC AATTGCCGGC CACCACGGTG
GCGCGGCTGG CCGAGCTGCA GTCGCGCATC CGCCCGCACT TCCTGTTCAA CGCGCTCAAC
AGCGCGGTGG CGCTGGTGCG CATCGATCCG CAGCGCGCCG AAGACGTGCT GGAGGCGTTA
GCCGAGCTGT TCCGCGCTGC GCTGGTCGGC TCGGGCGAGC AGGTCACGCT CGGTGAGGAG
ATCGAGCTGG CGCAACGCTA TCTGGCGATC GAGGAGGTGC GCTTCGGCGC GCGCCTGAAG
GTCAGCTGGC AGCTCGACCC GCGCGCGGCC ACCGCCCGGG TGCCGTCGCT GATGCTGCAG
CCGCTGGTCG AGAACGCCGT CAAGCACGGC GTCGAGGCAG CGGCCGAAGG CGGCGAGATC
CGCATCCGCA CCCAGGCGCA CAAGGGCCAG GCGCTGATCA GCATCACCAA CAGCGTGCCC
AGCGGCCCGC CGCGCCCCGG CCAGGGCATG GCGCTGCGCA ACGTGCGCGA ACGCCTGCTG
CTGCTGCACG ACCTGACGAT GCGCTTCGAG GCCGGCGCGA TCGAGGGCGG CCGCTACCGG
GTACGCATCG CCGTGCCGCT GGTGCCGTGA
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| Protein sequence | MSNLHSEPPA DRRVAPRAVP RQSRSAFDVC QGGVVLRAIL FVHGVVALGL AFGSAGWLGW
LTDLGLAVAI ALPATLLWLV LVCAAQKLWV KLPLPGQWAA MAGLGALCAV AGWAPLVALH
LLEPTGLGGW APLAAGAALA AAIFHWLQQR MRLQLPATTV ARLAELQSRI RPHFLFNALN
SAVALVRIDP QRAEDVLEAL AELFRAALVG SGEQVTLGEE IELAQRYLAI EEVRFGARLK
VSWQLDPRAA TARVPSLMLQ PLVENAVKHG VEAAAEGGEI RIRTQAHKGQ ALISITNSVP
SGPPRPGQGM ALRNVRERLL LLHDLTMRFE AGAIEGGRYR VRIAVPLVP
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