8 homologs were found in PanDaTox collection
for query gene Lcho_2618 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_2618  hypothetical protein  100 
 
 		 197 aa  378  1e-104  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.891939 
 
 
-
 
NC_003295  RSc2304  hypothetical protein  47.17 
 
 		 205 aa  56.2  0.0000003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.221973  normal  0.195927 
 
 
-
 
NC_007974  Rmet_4707  hypothetical protein  39.62 
 
 		 202 aa  51.2  0.000008  Cupriavidus metallidurans CH34  Bacteria  normal  0.813409  normal  1 
 
 
-
 
NC_007492  Pfl01_1986  hypothetical protein  33.96 
 
 		 172 aa  50.8  0.00001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0936785  normal  0.343947 
 
 
-
 
NC_009512  Pput_2292  hypothetical protein  34.11 
 
 		 168 aa  49.3  0.00004  Pseudomonas putida F1  Bacteria  normal  0.327454  normal  0.79466 
 
 
-
 
NC_012560  Avin_29110  hypothetical protein  36.17 
 
 		 175 aa  46.6  0.0002  Azotobacter vinelandii DJ  Bacteria  normal  0.189229  n/a   
 
 
-
 
NC_008009  Acid345_1579  hypothetical protein  29.11 
 
 		 185 aa  44.3  0.001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.889797  normal  0.0471891 
 
 
-
 
NC_010322  PputGB1_2458  hypothetical protein  36.45 
 
 		 169 aa  41.2  0.01  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>