Gene Lcho_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2618 
Symbol 
ID6162990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2869237 
End bp2869830 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content74% 
IMG OID641665394 
Producthypothetical protein 
Protein accessionYP_001791648 
Protein GI171059299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.891939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCGC AGAACCGCAA GACCCTGTTG TGGGGCACCG CCGCCGTCGT GACCGCCTGG 
GCCGGCTGGA TCGTCTGGCG TGGCGACGAG GTGTCGCAGG CGGTCGTCGC ACCGCGCGCC 
ACGGCCGATC GCGCGCCGGC CCGGTCGCAG CGGCCGGTGA CGGCGATCGA TGCGGCGGCC 
GATGCGGTCG CGGTGTCGAC ATCCGCATCG GCACCCGCGT CAGGGCTGCC CGCCGGCGAG 
CGCCTGGCTG CCGATTCCGA ACGCGACGCG TTCGGCACCC GCAACTGGCT GGCCCCGCCA 
CCACCGCCGC CGAAGGCCGC GCCGGCGCCG ATCGAAGTGG TCGCGGCGCC GGTTGCGCCG 
CCGCCACCGC CGCCGCCCAC GCTGCCCTAC CGGTTCGTGG GCATGCTCGC CGGCGAGCCG 
GCTGGCCGGC CGCAGGTGTT CCTGGCGCTG GGTGACAAGC TGCTCGTCGC TGCGCCCGGT 
GATGTGCTCG ACGGCGGCTT CCGCCTCGAG ACCATCCGCA ACACCGAACT CGTCTTCACC 
CATGTCCAGC AAGGCCTGAC CGTGCGCATG CCCCTATCCG GAGTTCCTTC GTGA
 
Protein sequence
MNAQNRKTLL WGTAAVVTAW AGWIVWRGDE VSQAVVAPRA TADRAPARSQ RPVTAIDAAA 
DAVAVSTSAS APASGLPAGE RLAADSERDA FGTRNWLAPP PPPPKAAPAP IEVVAAPVAP 
PPPPPPTLPY RFVGMLAGEP AGRPQVFLAL GDKLLVAAPG DVLDGGFRLE TIRNTELVFT 
HVQQGLTVRM PLSGVPS