| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2504 |
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| Symbol | |
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| ID | 6162512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2728458 |
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| End bp | 2730296 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665274 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001791534 |
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| Protein GI | 171059185 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000127678 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCAGCG CCTTCAACTT CAACGCCTCG CCCTTCGATT GCCTGAACGC GCCGCAGCGT
GAGCTGGTGC GCCACAGCGT CGACATCGCC TACTTTCCGG CCGGCGAGCC GGTGCTCAGG
AGCGGCGACA CGCCGACGCA CCTGTTCGTG ATCATCAAGG GCCACGTCAG CCAGTTCGAG
GGCGACGAGC TGGTCGCCAC CTACGGGCCC GACGACAGCT TCGACGGCCG CTCGCTGGTC
ACCGGCCGGG TCAACGGCCG CTTCGTGGCG GCCGAGGAGG TGGTGGCCTA CCAGCTGGCG
CGCCAGACGG TGACCGAGCT GATCGCCGCC AACGCCACCT TCGCGGCGCT GCTGTTCTCG
GACCTGTCGC AGAAGTTGAG CGCGCTGTCC GAGCGCCAGA GCCAGCACGA GATGCAGTCG
CTGACGATGG CGCGCATCCA GGAGGTGTTC CTGCGTGCGC CGGTGTTCGT CGACGCGGCC
ACCGACATCG TCTCGGTGGT GCGGGCCTTC CACGCCAACC GCACCTCCAA CGTGCTGGTG
CGCGACGACG CCTCGGTGCC GTCGCGGCTG GGCATCTTCA CCACCACCGG GCTGCAGCGC
GCGATCCTGC ACGGCATGCC GCTCGACCGA TTGCCGGTCG GCGAGCTGGC CACCTTCGGG
CTGGTGAGCT GCGAGCCGAG CGACTACCTG TTCGACGCAC TGGCGATGAT GATCCGCCAC
CAGGTGCACC GGGTGGTCGT GATCGACCGC AGCGGTGCCG ACCCGCAGGT GGTGGGCGTG
CTCGAACAGC TCGATCTGCT GAGCTTTTTG TCGAACCACT CCTACCTGAT CACGCTGCAG
ATCCTGGAGG CGCAGGATCT CGCCGCGCTC GAGGCCGCCG CCCACCAGAT CACCCGCCTG
ATCACGCTGC TGCACCGCGG CGGCACGCGG GTGGGCATGA TCGCCCGGCT GGTTCAGGAG
CTCAACGCCA AGCTGTTCGA GCGTGCCTGG CAGCTGGTGG CGCCGGCCGA TCTGGTCGCC
AACAGCTGCC TGTTCGTGAT GGGCAGCGAG GGCCGCGGCG AGCAGCTGCT GCGCACCGAC
CAGGACAACG GCCTGATCCT GCGCGACGGC TACACGCCGC CGACCGACCT GGCCGATGTC
TGCAGCCGCT TTTCGCAGGC GCTCGCCGGT TTCGGCTACC CCGAGTGCCC TGGCGGGATC
ATGGTCAGCA ACCCCGACTG GCGTCACCCG GCGGCCGAGT TCGGCCAGCG CGTGCGGCGC
TGGCTGCAGC TGCCCGACGG CGACAGCCTG ATGGCGCTGG CGATCTTCAT GGACGCGCAC
GCCGTCTGCG GCGACCACGC GCTGCTCGAC CAGGTGCGCG GCGAGATCTT CGGGCTGGTC
GGAGAAAACG ATTCGCTGCT GACGCGTTTC GTCGCCGCGA TCGACGCCTT CAACGAAGGC
AGCGGCTGGT GGAACCGCCT GCTGACGCTC GGCACCGACG AGCGCGAGGC GCTGCACCTC
AAGAAGGCCG GCATCTTCTC GCTCGTGCAC GGTGTGCGCG CCGTCGCGCT GCAGCAGCAC
GTGGCGGCCA CCGGCACGGT CGACCGCATC GAGGCGCTGG TGGCGATGGG CAAGCTGCCC
AAGGAAACCG GCGCCGAGCT GACCGACAGC CTGCACTACC TGATGGCGCT GCGCCTGAAG
GCCGCGCTGG CCGAGATGGA CCTGGGCCGG CCGGTCACCG GCACGGTCGA CCTCGGCGCC
CTGACGCCGC TCGAGCGCGA TCTGCTGAAG GACGCGCTCG GCGCGGTCAA GCGTTTCAAG
GCGATGCTGC GCCACCGCTT CCACCTGGAC ACGATGTGA
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| Protein sequence | MPSAFNFNAS PFDCLNAPQR ELVRHSVDIA YFPAGEPVLR SGDTPTHLFV IIKGHVSQFE
GDELVATYGP DDSFDGRSLV TGRVNGRFVA AEEVVAYQLA RQTVTELIAA NATFAALLFS
DLSQKLSALS ERQSQHEMQS LTMARIQEVF LRAPVFVDAA TDIVSVVRAF HANRTSNVLV
RDDASVPSRL GIFTTTGLQR AILHGMPLDR LPVGELATFG LVSCEPSDYL FDALAMMIRH
QVHRVVVIDR SGADPQVVGV LEQLDLLSFL SNHSYLITLQ ILEAQDLAAL EAAAHQITRL
ITLLHRGGTR VGMIARLVQE LNAKLFERAW QLVAPADLVA NSCLFVMGSE GRGEQLLRTD
QDNGLILRDG YTPPTDLADV CSRFSQALAG FGYPECPGGI MVSNPDWRHP AAEFGQRVRR
WLQLPDGDSL MALAIFMDAH AVCGDHALLD QVRGEIFGLV GENDSLLTRF VAAIDAFNEG
SGWWNRLLTL GTDEREALHL KKAGIFSLVH GVRAVALQQH VAATGTVDRI EALVAMGKLP
KETGAELTDS LHYLMALRLK AALAEMDLGR PVTGTVDLGA LTPLERDLLK DALGAVKRFK
AMLRHRFHLD TM
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