Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2496 |
Symbol | |
ID | 6160989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2717456 |
End bp | 2718373 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641665266 |
Product | phosphoribosylpyrophosphate synthetase |
Protein accession | YP_001791526 |
Protein GI | 171059177 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000000223709 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGATCA GCCAGGTTCT CGCCTTCGAC GACGAACAGG CCCCGGCCGG CGCGCTGGCG CGCACGCTGG GCGTGCCGCT GGCGCTGATC GGGCGCCACC GTTTCCCCGA CGGCGAGATC AGGCTGCGAC TGCCCGCGGC GCTGCACGGC AGCGTGCTGA TCTGGCGCGG CCTGCAGCAG CCCAACGAGA AGCTGGTCGA GCTGCTGATC GGCGCGCCGA GCGCCCGCGA GCTGGGCGCG CAGCGGCTGC TGCTGGTCAG CCCCTACCTG GCCTACATGC GCCAGGACAT CGCCTTCACG CCCGGCGAGT CGGTCAGCCA GCGCCACATC GCGCGCCTGC TGGCGCAGCA TTTCGACGCC GTGATCACGG TCGATCCGCA CCTGCACCGC ATCGCCTCGC TCGACGAGGT GATGCCCGCC GGCCGCGGCG TCAGCCTGTC GGCCGCCGGC CTGCTCGGTG CCTGGGCGGC GCGCCAGGTG CGCGACGTGC TGCTGCTCGG CCCGGACGAA GAATCGGCGC CCTGGGTGCG GTGTGCCGCG CGCGACGGCG CCACCGCGCT CGGCCGGCCG CAGCCGCTCG ACCACGCCTG CTGCGTCAAG CAGCGCAGCG GCGACCGCGA CGTGCGCGTC ACCTTGCCGC CCGGCCTGGC GCTGCAGGGC CGCGCGGTGG TGCTGATCGA CGACATCGCC AGCACCGGCC GCACCCTGCT CGACGCCACG AGGCAGTGCC TCGAGGGCGG CGCCGCCAGC GTCGACGTGG CGGTCACGCA CGCGCTGTTC GTGGGCGACG CGCACACGCT GCTGCGGCAA GCCGGCGTGC GCCACATCTG GAGCACCGAC TGCGTGCCGC ACGCCAGCAA TGCCGTCAGC GTGGTGCCGC TGCTGGCCGA GATCGTGCGC GACAAGTTCA TGTCCTGA
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Protein sequence | MTISQVLAFD DEQAPAGALA RTLGVPLALI GRHRFPDGEI RLRLPAALHG SVLIWRGLQQ PNEKLVELLI GAPSARELGA QRLLLVSPYL AYMRQDIAFT PGESVSQRHI ARLLAQHFDA VITVDPHLHR IASLDEVMPA GRGVSLSAAG LLGAWAARQV RDVLLLGPDE ESAPWVRCAA RDGATALGRP QPLDHACCVK QRSGDRDVRV TLPPGLALQG RAVVLIDDIA STGRTLLDAT RQCLEGGAAS VDVAVTHALF VGDAHTLLRQ AGVRHIWSTD CVPHASNAVS VVPLLAEIVR DKFMS
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