Gene Lcho_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2224 
Symbol 
ID6160634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2426928 
End bp2427398 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID641664994 
ProductRbsD or FucU transport 
Protein accessionYP_001791255 
Protein GI171058906 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0802537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGG GCATCGACCC CCTGCTGACC CCCGACCTGC TGAAGGTGCT GGCCGAGATG 
GGACACGGCG ACGAGATCGT CATCGCCGAC GCCAACTTCA CCGCCGCCAG CCTGGCGATC 
GGCGCCAACG GCGTGCGCAA GCCGGTGCTG CACGTCAGCG GCGCGGGCAT CGGGCGCACG 
GTCGAGGCCG TCATCAAGCT GCTGCCGCTG GACGCCGCGG TGGAGCAGCC GGTCGCCTAC 
ATGCAGGTCA GCGACACCCC GGCGGGCTAC CGCAGCCGCC TGCAGCGCGA CGTCATCGCC 
ATGCTGGCCG ACGGCGGCCA TGCGCGCCCC GAGCAGTGTC AAGCGATCGA GCGCTTCGCC 
TTTTATGATC GCGTCAGTGG CGCCTTCGCC ATCGTGCTCA CCGGTGATCT GCAGCCGTAC 
GGCAATTTCA TCCTCAAGAA GGGTGTGATC GGCGAGGCGC TCGACCCCTG A
 
Protein sequence
MLKGIDPLLT PDLLKVLAEM GHGDEIVIAD ANFTAASLAI GANGVRKPVL HVSGAGIGRT 
VEAVIKLLPL DAAVEQPVAY MQVSDTPAGY RSRLQRDVIA MLADGGHARP EQCQAIERFA 
FYDRVSGAFA IVLTGDLQPY GNFILKKGVI GEALDP