Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1820 |
Symbol | |
ID | 6163854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1967234 |
End bp | 1967536 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641664582 |
Product | hypothetical protein |
Protein accession | YP_001790852 |
Protein GI | 171058503 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00303252 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGAGCG GCTACCCCGC CAGCTTCACC CGCGAACAGG GTTTCAGCGA GGCCGACTGG CTGTCGTGCC TGCCGGGCGC GGTGCGGGGT CGTCCTTGGC GCCGCCCGCG CGACGGCCGG GCGGAGGTCG ACATCGACGA CGGCCGCCTG CATCTGGCGT GGCAGCCGCT GGCGCCGCGC CAGATCGCGC TGATCCGCAT CCCGCGGATG GCGGTGAGCT ACCGCTTCGA GGGCGTCGGC GACGATGCCC GCGAGGCCTT CATGAAGTAT TTCGACCTGT TCATGCAGCG CGGCGGCGGC TGA
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Protein sequence | MQSGYPASFT REQGFSEADW LSCLPGAVRG RPWRRPRDGR AEVDIDDGRL HLAWQPLAPR QIALIRIPRM AVSYRFEGVG DDAREAFMKY FDLFMQRGGG
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