| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1775 |
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| Symbol | |
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| ID | 6162929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1911153 |
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| End bp | 1912145 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664537 |
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| Product | helix-turn-helix type 11 domain-containing protein |
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| Protein accession | YP_001790807 |
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| Protein GI | 171058458 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000116568 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCGCA CCGAACGCTT CTACAAGATC GAGATGCTGA TCAAGAGCCG CGGCTCGGTC
AGTTTTGCCA CCCTGATGGA CGAGCTCGAG GTGTCGCGCG CCACCCTCAA GCGCGATCTC
GACTACCTGC GCACCCGCAT GGACGCGCCG ATCGTCTACG AGCGCGACAG CAACGGCTAC
CGCTTCGAGC AGCCCAGCGG CCGCGGCGCC AACGGCCGCG CCCAGGAGGC CAGCCACGAA
CTGCCGGGCG TCTGGTTCAG CGAGCGCGAA CTGCACGCGC TGCTGACCAT GCACCAGCTG
ATCCAGGGCC TCGACAGCGG CGGCATGCTC GGGCGCCACC TGCAGCCGCT GCTCGACAAG
CTGCACGGCA TGCTCGGCAC GACCGAGGGC GAGGCGCGCG AGCTGATGCG GCGGGTGCGC
ATCCTCAGCC CGGCGCAGCG GCCGGTGGCA GGCAAGTTCT TCGAGCGCGT GGCCAGCGCG
CTGCTCGAAC GCCGCCGCCT GCAGATCACC TACTACACGC GCAGCAAGCA GGCCGAATCC
GACCGGATGG TGTCGCCGCT GCGCCTGGTG CACTACCGCA GCACCTGGTA CCTCGACGCC
TGGTGCCACG CCAGCGAGGG CCTGCGCCGC TTCGCGCTCG ACGCCCTGCG CGGCGCCGAG
GTGCTGACCC AGCGCGCCAA GGACGTGGCG ATGAAGACCG TCGAGGCCGA GCTCGACGCC
GGCTACGGGA TCTACGCCGG CCGCGACGTG CGCCAGGCCA CGCTGCTGTT CAGCCCCGGA
GCCGCGCAGT GGGTGGCCAA CGAGCTCTGG CATCCGCGCC AGGAGCTCGA GCCCCAGCCC
GACGGCAGCC TGCGCATGCG CCTGCCCTAT GCCGACGACA CCGAACTGCT GATGGACCTG
CTGCGCCACG GCCCCGACGT CTGCGTCGAA GGCCCGCCGG CCCTGCGCCA GAAGCTGCAG
CAGCGCCTGC AGGCGGCGTT GGGGCACTAT TGA
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| Protein sequence | MDRTERFYKI EMLIKSRGSV SFATLMDELE VSRATLKRDL DYLRTRMDAP IVYERDSNGY
RFEQPSGRGA NGRAQEASHE LPGVWFSERE LHALLTMHQL IQGLDSGGML GRHLQPLLDK
LHGMLGTTEG EARELMRRVR ILSPAQRPVA GKFFERVASA LLERRRLQIT YYTRSKQAES
DRMVSPLRLV HYRSTWYLDA WCHASEGLRR FALDALRGAE VLTQRAKDVA MKTVEAELDA
GYGIYAGRDV RQATLLFSPG AAQWVANELW HPRQELEPQP DGSLRMRLPY ADDTELLMDL
LRHGPDVCVE GPPALRQKLQ QRLQAALGHY
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