| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1692 |
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| Symbol | |
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| ID | 6163200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1806315 |
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| End bp | 1807382 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664452 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790724 |
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| Protein GI | 171058375 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.291181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAC TCTCCATCCG CAACGTCCGC AAGAGCTTCG GCGACGTCAA CATCCTCAAG
GGCATCGACA TCGAGATCGA AAAGGGCGAG TTCCTGATCC TGGTCGGGCC GTCGGGCTGC
GGCAAGTCGA CGCTGCTCAA CATGATCGCC GGGCTCGACG AGCCGACCTC GGGCACCATC
CACATCGGCG ATCGCGACGT CACCCACGCC CTGCCCAAGG ACCGCGACAT CGCGATGGTG
TTCCAGAGCT ACGCGCTCTA CCCGAACATG AACGTGGCGC AGAACATCGC CTTCGGCCTG
GAGATGCGCA AGGTGCCGCC GGCCCAGCGC CAGGCCGCCG TGGCGCGCGT GGCCAAGATG
CTGCAGATCG AGCACCTGCT CGAACGCAAA CCGGGCGCGC TGTCGGGCGG CCAGCGCCAG
CGCGTGGCGA TGGGCCGGGC ACTGGCGCGT GACCCGCTGC TGTTCCTGTT CGACGAGCCG
CTGTCCAACC TCGACGCCAA GCTGCGCGTC GAGATGCGCG CCGAGATCAA GCTGCTGCAC
CAGCGCACCA AGACCACCAC CGTCTACGTC ACGCATGATC AGGTCGAGGC CATGACGCTG
GGCGACCGCA TCGCGGTGAT GAAGGACGGC GTGGTGCTGC AGTTCGGCAG CCCGGACGAC
ATCTATGCCC GCCCGGCCAC CAAATTCGTG GCCGAGTTCA TCGGCTCGCC GTCGATGAAC
ATGCTGCAGG CCAGCCGTGC CGCCGGCGGG CTGCACGCCA AGGGCATCGA CCTGCAACTC
GGTGCGCCGG AACGCGCCAG CCTGGCCGCG CAGACGGGCA CCGACTGGAT CTACGGTCTG
CGCCCCGAGG CGGTCAGCTT TGCCGACGCC GGCCTGCCGG GCCGCATCAG CATGGTCGAG
CCGACCGGGC CTGAAACCTA CGCGAGCGTC GAGACCGGCG CGGGCGTGGT GGTGGCGCGT
GTGCCCGGCA AGCTCGACCG CCGCGTGGGC GACAACGTGC ACCTGCACTG GTCGGCCGGC
GACGTGCACC TGTTCGACGC CAGCACCGAG ATCCGGCTAG CCGCCTGA
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| Protein sequence | MGALSIRNVR KSFGDVNILK GIDIEIEKGE FLILVGPSGC GKSTLLNMIA GLDEPTSGTI
HIGDRDVTHA LPKDRDIAMV FQSYALYPNM NVAQNIAFGL EMRKVPPAQR QAAVARVAKM
LQIEHLLERK PGALSGGQRQ RVAMGRALAR DPLLFLFDEP LSNLDAKLRV EMRAEIKLLH
QRTKTTTVYV THDQVEAMTL GDRIAVMKDG VVLQFGSPDD IYARPATKFV AEFIGSPSMN
MLQASRAAGG LHAKGIDLQL GAPERASLAA QTGTDWIYGL RPEAVSFADA GLPGRISMVE
PTGPETYASV ETGAGVVVAR VPGKLDRRVG DNVHLHWSAG DVHLFDASTE IRLAA
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