Gene Lcho_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1387 
Symbol 
ID6160301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1472005 
End bp1472676 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID641664141 
Productmethyltransferase type 11 
Protein accessionYP_001790420 
Protein GI171058071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATCG AGTTGCTGAC CCGCAAGCTC ATGCGCACCC TGCGCGATGA CGGCGTTGCC 
GCCGCCTGCC GGCGCGTCGT GGCGCAGCTC GGCGACCCGC CGGAGGTGGC GGATTTCGAC 
CGCCGCCACG GCACCGACAC CGGTGGCCTG GCGCCGCTGT GGAGGCTCAG CATCGGCTCG 
CCGAACGCAC GTCACGGCGA ACGCTACGAG GCCACCGACG AACACGAGCT GGTGGCGGCG 
CTCGAGTTCC TCGGCGAAAA CCTGCGTGGC TACACCTTCA TCGACCTCGG CTGCGGCAAG 
GGCCGCACGC TGCTGGTGGC CGCGCGCATG GGCTTCGCGC AGGTCATCGG CGTGGAGTTC 
GCGCGCGAGC TGGCCGAGAT CGCCACCGAC AACCTGCACC GGCAGCAGGC AAGCACTGCC 
ATCGTGCTGC ATGCCGACGC GGCCGACTTC GTGTTCCCGC ACGGCGATCT GGTGCTCTAT 
CTCTACAACC CGTTCTCCGA GCCGGTGCTG CAGCAGGTGA TGGACCATCT GCGCGCAGCG 
GACGCCGGCA GACGCTACGT GATCTACAAG CGACCGCGCT GTGCGGCGAT GCTGGACACG 
AGCGGTTTCC TCGAACGACA CGGGCATCCG CCGAGCGCGC CGCAGATGGC CATCTGGCGC 
GGCTGTGCCT GA
 
Protein sequence
MNIELLTRKL MRTLRDDGVA AACRRVVAQL GDPPEVADFD RRHGTDTGGL APLWRLSIGS 
PNARHGERYE ATDEHELVAA LEFLGENLRG YTFIDLGCGK GRTLLVAARM GFAQVIGVEF 
ARELAEIATD NLHRQQASTA IVLHADAADF VFPHGDLVLY LYNPFSEPVL QQVMDHLRAA 
DAGRRYVIYK RPRCAAMLDT SGFLERHGHP PSAPQMAIWR GCA