| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1376 |
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| Symbol | |
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| ID | 6159758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1459090 |
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| End bp | 1460487 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664130 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001790409 |
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| Protein GI | 171058060 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCGG CGCTGCGCAC GCGCCTGGTC CTTTTCGTGC TGGTGTTCGT CGCGACCGTC
GCGGCGGCGG CGGTGGTGGC CGTGTCCTTG CCCAAGACCT ACCGGGCCAC CGCGTCGCTG
CTGGTGGCCG AGTCGCTGCG CGGCAATGCC CTGCCCGAAC GCGGCGCCTA CCTGCAGACG
CAGGCCGACA TCATCAAGAG CGAAACCGTC GCCCGCCGGG TGGTCGCCGC GCTCAAGCTG
GCCGACAGCC CGCAGGCTCG GCAGGCCCAT GCACGCACGG CCAGCGACGG CTCGTTCGAG
GACTGGCTGG CCACCCGCTG GCTGGCGGCG CCGCAGGTCG ATCTGGCGCA CAGCAGCGTC
ATCCGCATCG GCGTCGACGC GCCCAAGGCG AGCACGGCCG CCGAGACCGC CAATGCCTAC
GCCCAGGCCT ATGTCGAGCT GGCCCGCGAA CTGCGCACCG ACAACACCGG GCGCGCCGAA
CGCCTGCTCG ACACCCGGCT GACGACCCTG CGCAACGACC TGCGGCAGGC GCAGGACCGG
CTGCTCGACC ACCAGCGCCG CAACGGCATC GTCTCGTCCG ACGCCCGCGC CGACCTGCGC
GAGACGCGCC TGGCCGAGGT GTCCGCGCAG CTGTCGCGGG CGCGCGAACA GAACCTCGAC
CTCGCCAGCC GCCAGCAGCA CGTGCGCCAG TTGCGCCAGC AGGGCAGCCC GCTGGACCGG
CTCAACGAGG TCCAGACCGA CTCGCAGGTG CAGCGCCTGA GCGCCGAGCT TGAGCAGGGC
GAGGCCCGGC TGCAGGCGCT GTCGCAGCAG TACGGCACCG CCTACCCGCC CTACCAGAGC
CAGCTGGCTG AAAACGCCCG CCGCCGTGCC GCGCTCGACG CCCAGATCAA CAAGGTGCTG
GCCGGCCTCG AGAACGCCGC CGCACAGGGC CGCTGGCGTG CCGCGGCGCT CGAGGCCGAA
CTGGCCGGCC AGCGCTCGCG GCTGCTGGCG GTCGGATCCG AACGCGGTGA ACTGGCCACG
CTGACGCACA ACGTCGAGAG CGCCCAGCGC ACCTACGACA TGGCGGTGCA AGGCTTCATG
GTCGACATGG TCGGCAACGA GCTCTACAAC TCGCAGGTGT CGCTGCTCAG TCCGGCCTCG
GTGCCGCTCG AACCGCATGC GCCCCGGATC GGGCTGCTGA TGGCGGCAGC GGTCGTGGCC
GGTGCGCTGC TGGGCCTGGC CACCGTCGTC ATGCTGGAAC TGCGCGATCG GCGGGTGCGT
TCGGCGGTCG ACCTGCGCCG GCTGACGGCC GACGATTCGG TGCCGCTGCT GGGCGTGACC
AGCCGCTGGA GTCCGCCCAG GCAGGCACGA GCGGCGTCGC TCCAGCCGGC CTCGACGCTG
ACCTTTCAAC CCCGCTGA
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| Protein sequence | MLAALRTRLV LFVLVFVATV AAAAVVAVSL PKTYRATASL LVAESLRGNA LPERGAYLQT
QADIIKSETV ARRVVAALKL ADSPQARQAH ARTASDGSFE DWLATRWLAA PQVDLAHSSV
IRIGVDAPKA STAAETANAY AQAYVELARE LRTDNTGRAE RLLDTRLTTL RNDLRQAQDR
LLDHQRRNGI VSSDARADLR ETRLAEVSAQ LSRAREQNLD LASRQQHVRQ LRQQGSPLDR
LNEVQTDSQV QRLSAELEQG EARLQALSQQ YGTAYPPYQS QLAENARRRA ALDAQINKVL
AGLENAAAQG RWRAAALEAE LAGQRSRLLA VGSERGELAT LTHNVESAQR TYDMAVQGFM
VDMVGNELYN SQVSLLSPAS VPLEPHAPRI GLLMAAAVVA GALLGLATVV MLELRDRRVR
SAVDLRRLTA DDSVPLLGVT SRWSPPRQAR AASLQPASTL TFQPR
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