Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1212 |
Symbol | |
ID | 6160808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1296968 |
End bp | 1298539 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663966 |
Product | coenzyme A transferase |
Protein accession | YP_001790246 |
Protein GI | 171057897 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCA AGTTCGTATC GGCCGATGAC GCGGCCCTGT TGATCAATGA CGGCGACACC GTGGCGCTGA TGGGCGGCGG CGGCGGCCTG ATGGAGGCGA CCTGCCTGTT CCAGGCGGTC GAGCGGCGCT TCCTGGCCAC CCAGACGCCG CGCAATCTCA CGTGCGTGCA CGCGCTGGGC ATCGGCGACA AGCAGTCGCG CGGCATGAAC TGCTTCGCCT ACGAGGGCCT GGTGCGCAAG GTGATCGGCG GCCACTGGGT CTGGTCGCCA CGCATGCAGC AGCTCGCGCT GGACGAGAAG ATCGAGGCCT ACATCCTGCC CGGTGGCGTG TCGTCGCAGC TGCTGCGCGA GATCGGCGGC GCGCGGCCGG GGCTGTTCAC GCACGTCGGC CTGGGCACCG TCTGCGACCC GCGCCACGGC GGCGGGCGCA TGAACGCGAG CGCCAAGGAT GACCTGGCCG AGGTCGTCAC GGTCGATGGC CGCGAGTACC TGCGCTACAA GCCGTATGCG GTCAACGTCG CGCTGGTGCG CGCCTCGGCG GCCGACGAGG ACGGCAACAT CAGCTTCGAA CACGAGGCCG CCAATCTCGA TGCCGCGTCG ATCGCATTGG CCGCGCGCAC CAGTGGCGGC CGCGTGATCG TGCAGGTGCG CGAGCGCCTG CCACGTGGTG CGCTCAAGGC CCGCGAGGTG CGCATCCCGG CCGCCTGGGT CGATGCGATC GTGGTCGACG CGGATCAGCG CACCAGCTAC GACATCCCCT TCGACGCCAG CCTGAGCGGC GAACTGACCG GCCCGCAGCG CTTCGAACTC GAAGCGCCTG GCGACGAGCC CTTCAACGAG CGCCAGGCGG TGGCCCGGCG CGCGGCCTGC GAACTGGTCG AAGGCGCGGT CGTCAACTAC GGCGTCGGCG TGCCCGATGC AGTGGCCAAG CTGGTGGCGC GGCGCGGCGA ACTCGACCGC ATCTACCAGA CCATCGAACA CGGCACCTAC GGCGGCAGCC TGCTCGACGG CGTGCTGTTC GGCTACGCCC GCAACGCCAG CGCGATGCTG GATGCGCCGA CACAGTTCGA CTTCTACGCC GGCGGCGGGC TCGACATCGC CTTCCTCGGC TTCGGCGAGT TCGATGCGTT GGGCAACGTC AACGTGTCGA AACTCGGCGG CCTGACGGTC GGCCCGGGCG GCTTCATCGA CATCGCCCAG AACGCCCGCA AGGTGGTGTT CTGCGGCACC TTCGCGGCCA AGGGCGTCCA GCTCGAAACC GGCGACGGCA CGCTGTGCGT GGTCAAGCCC GGCGAGGTGC GCAAGCTCGT GCAGCAGGTC GACCAGGTCA CCTTCAGCGG CCCGCAGGCG CTGCTGCGCG GCCAGCAGGC GCTCTACCTG ACCGAGCGGG CGAACTTCCG CCTGACGCCC GAAGGCATGG AGCTGTTCGA GATCGCGCCC GGCATCGATC TGCAGCGCGA CGTGCTCGAC CAGATGGACT TCGTGCCGCG GCTGGCCGAG AACATTGCGG TGATGCCGGC GTCGCACTTC CGACGCGAGG ACGATCGGCT GGGCGCGCTG TCGAGCCGAT AG
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Protein sequence | MKSKFVSADD AALLINDGDT VALMGGGGGL MEATCLFQAV ERRFLATQTP RNLTCVHALG IGDKQSRGMN CFAYEGLVRK VIGGHWVWSP RMQQLALDEK IEAYILPGGV SSQLLREIGG ARPGLFTHVG LGTVCDPRHG GGRMNASAKD DLAEVVTVDG REYLRYKPYA VNVALVRASA ADEDGNISFE HEAANLDAAS IALAARTSGG RVIVQVRERL PRGALKAREV RIPAAWVDAI VVDADQRTSY DIPFDASLSG ELTGPQRFEL EAPGDEPFNE RQAVARRAAC ELVEGAVVNY GVGVPDAVAK LVARRGELDR IYQTIEHGTY GGSLLDGVLF GYARNASAML DAPTQFDFYA GGGLDIAFLG FGEFDALGNV NVSKLGGLTV GPGGFIDIAQ NARKVVFCGT FAAKGVQLET GDGTLCVVKP GEVRKLVQQV DQVTFSGPQA LLRGQQALYL TERANFRLTP EGMELFEIAP GIDLQRDVLD QMDFVPRLAE NIAVMPASHF RREDDRLGAL SSR
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