| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0873 |
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| Symbol | |
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| ID | 6163593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 937794 |
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| End bp | 938303 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663623 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001789910 |
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| Protein GI | 171057561 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCA GCCCCTTCCT GGCCCTCGCA ATGGCTTGTG CGCCCCAGGT AGACAGCCGC
ACCACCCATG CACTGGCCAC GGTCGAGAGC AGCCTCAATC CGCATGCGAT CGGCGTGGTC
GGCGGGGTGC TGGTGCGCCA GCCTCGCTAC CGCCAGGAGG CACTGGTCAC GGCCCGCTCG
CTGCAGGCCC AGGGCTGGAA CTTCAGTGTC GGGCTGGCCC AGATCAACGT GCGCAACGTG
CGCCGCATGG GCCTGCGCCT GGAAGATGCC TTCGAACCTT GCACCAACCT GCGGGCTATG
CAGACGATCC TGGGCGACTG CTACGCGCGA TCGACGGTGC TTGGCAGCAC CGGCCCGGCA
CGCGACCAGC ACCGGCTGCG GCAGGCCCTG TCCTGCTACT ACAGCGGCAA TTTCGAGACT
GGCTTCCGGC ACGGCTATGT GCAGCGGGTG CTCGACGCCG CACGCCGCAT GCCATCGGCC
ATTCCCCTCC CTGTTCGCCA CCGCCCCTGA
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| Protein sequence | MDASPFLALA MACAPQVDSR TTHALATVES SLNPHAIGVV GGVLVRQPRY RQEALVTARS
LQAQGWNFSV GLAQINVRNV RRMGLRLEDA FEPCTNLRAM QTILGDCYAR STVLGSTGPA
RDQHRLRQAL SCYYSGNFET GFRHGYVQRV LDAARRMPSA IPLPVRHRP
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