Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0667 |
Symbol | |
ID | 6163859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 721705 |
End bp | 722673 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641663418 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001789707 |
Protein GI | 171057358 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTG CAACCCGGCG CCAGCGCGCC GCAGCCCGTC GATCGCGGAC CAAGCTGGAC GCCGCCCGCG CCCCGGCCGC GACACCACCC CGGCCGTTCA GGCGGTCGCG CCTGCTGATC ATCGGCTGCG GCGACGTCGG CCAGCGCGTG GTGCGCGCCC TCGGCGGCCG CCTGCGGGTG CGCGCCCTCA CCTCGCAAGC CGAGCGCCTG CCGGCGCTGC GCGCGCTCGG CGTCACACCG CTGCTCGGCG ACCTCGATGA CGCCGCCAGC CTGCGCCGGC TGTCTGCGCT GTCGGGCTGG GTGCTGCACC TGGCCCCGCC ACCCGGCGCG GGCGAGCACG ACACCCGCAC CCGTGCCCTG CTGCACGCCT GGGCGATGGG CGGGAACGTT CGACGACTGG TCTACGCCAG CACCAGCGGG GTCTACGGCG ATGCCGCGGG CGCGCGTTTC GATGAAACCC GGCCGACCGC GCCGGCCACT GCGCGGGCAC GTCGCCGGGT CGACGCCGAA CAGCAGATCC GCCGCTGGGC GCGCCGCCAG GGTGTGGCAG CCAGCATCCT GCGCATCCCC GGCATCTACG CCGGCGACCG CCCCGGCGGC CATCCGCGCG AGCGCCTGCA GCGTGGCACG CCGGTGCTGC GCAGCGAGGA CGACGTCTAC ACCAACCACA TCCACGCCGA CGACCTGGCG CGCATCTGCC TGGCTGCGCT GATGCGCGGC CGGCCGCTGC GGGCCTATCA CGCCAGCGAC ACGAGCGACC TGCGGATGGG CGACTACTTC GACCTCGCGG CCGACCTGTG CGGACTGCCA CGCCCGCGCC GCATCAGCCG CACCGACGCG CAGCGGGAAC TCGGCCCGAT GCTGCTGAGC TTCATGAGCG AATCCAGGCG CCTGGACAAC GCCCGCCTGC TCAACGAACT GCGGGTGCAC CTGCGGCACC CGCACGTCCG GACCGGCCTG CTGGTCTGA
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Protein sequence | MTLATRRQRA AARRSRTKLD AARAPAATPP RPFRRSRLLI IGCGDVGQRV VRALGGRLRV RALTSQAERL PALRALGVTP LLGDLDDAAS LRRLSALSGW VLHLAPPPGA GEHDTRTRAL LHAWAMGGNV RRLVYASTSG VYGDAAGARF DETRPTAPAT ARARRRVDAE QQIRRWARRQ GVAASILRIP GIYAGDRPGG HPRERLQRGT PVLRSEDDVY TNHIHADDLA RICLAALMRG RPLRAYHASD TSDLRMGDYF DLAADLCGLP RPRRISRTDA QRELGPMLLS FMSESRRLDN ARLLNELRVH LRHPHVRTGL LV
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