| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0571 |
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| Symbol | |
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| ID | 6163187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 619586 |
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| End bp | 621280 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663320 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789611 |
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| Protein GI | 171057262 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCT CCACCGCCGA CTCCCCCGAT CTCGATCGCC TGCGCGAACA GGCCACCGCC
TCGCTGCGCC GCCTCGCGCA GCGGCCCGAT GCCGACGAAC TGGCGCAGGC CAAACACCAG
GTCGAGGCGC TGCGCAACGT GCGCGAGCTC GACCTGATGG GCCGGCTGGC CGAGGCCGTC
AGCCGCGTCG ACCCGAAGGA CGCGCGCAAC CGCCGGCTCT ACGCCCAGTA CCTGATCGAC
AGCGGCAAGG CCAGTGCGGC GATCGACCTG CTCAAGCCGC TGGCCGCGCG GCTGGCCAAG
GATCACCCCG AACACGCCGA AGCCACCGGC CTGCTCGGGC GCGCCTACAA GCAGATCTTC
TTCGACGCCG GCGACACGTC GAGCGCGGGC GCCCGCGAGG CGCTCAAGCA GGCGATCGCG
GCCTATCGCC GTCCCTACGA GGAGAACCGG CGCGCCAACG CCTGGCAGGG CGTCAACCTG
CTGGCGCTGC TCAGCCGCGC GCGCAGCGTG GGGCTGCGCG TGGCACCGGA TCTCCAACCT
GCCGAACTGG CCGCCGAACT GGTGGCCACG CTCGAAGCCG TGCCGGTGGC CGAGCGCGAC
AAGTGGTATC TGTCGACCCT CACCGAGGCC CGGCTGGGCC TCGGTCTCGA TGCCGGGCAC
ATGGACGAGC TGGAGCGCCA GTTGCACGCG TACGTGAGCG CGCCGGGCAC GGCGGCATTC
CAGATCGCCA GCACGCTGCG CCAGTTCACG CAGGTGTGGG GCCTGGACGA TGCGAGGCCG
GCGGCGCGGG GCTTCGATCC GGCGGCGAAC AGGGCCCGCA ACCTGCCCCA GATCCTGCGC
GCCCGCCTGT TGCAGCTGCC CGGCGGCGGG CTGGAGATGT CGTCCGGCCA GCTGCAGAGC
CTGCGCAGCG CGCCGCCGCC CGAGGCCGGC CAGCTCGAGG CCGTGCTCGG CACGCAGGGG
CCGCAGACCT TCGCTTGGTG GCGCGCCGGG CTCGAGAGTG CGCGCAGCGT GGCGGTGATC
CGCCAGAAGC TCGGCCGGCG GCTGGGCACC GGTTTCCTGG TGCGCGCGGC CGATTTCGGG
CTGACGCCGG GCGAGGAACT GCTGGTGCTG ACCAACTTCC ACGTCGTCAA CGCCAACGGC
GCGTCGCCGG GCATCAAGCC GGCGGCGGCC GAGGTGGTGT TCGAGGCCGC CGATCCGGGC
CGGGTCTACA CGGTGTCCGA GCTGCTGTGG AGTTCGCCGC CCGACCAGCA TGACGCCAGC
CTGCTGCGCC TGTCCACGCC GGTGGCCGAC ATCGCGCCGC TGGTCATCGC CAGCGAGCTG
CCGCCACGGC CTGTCGCAGT GGCGGATGCA TCAGCAGCAG GGGCTTCGGC CGATGCGCCG
CAGGTCTATG TGGTCGGTTA TCCGGGCGGG CGCGAGCTGT CGTTCTCGTT CCAGGACAAC
GAACTGCTCG ACCACGAAGG CCCGGACGGC GGCCAGCCGC AGATCCCCGG CGTCTGCCGC
GTGCACTACC GCGCGCCCAC CGAGGGCGGC AGCTCCGGCA GCCCGGTGTT CAACGCGACC
GCCTGGGAGG TGATCGCCCT GCATCACAAG GGCGGCAAGT TCGGCATGCC GCGCCTGAAC
GGCCAGCCCG GCACCTACGC GGCCAACGAG GGACTGGCGA TCAATACGCT GATCGCGGCG
ATGCACGCCC GCTGA
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| Protein sequence | MSTSTADSPD LDRLREQATA SLRRLAQRPD ADELAQAKHQ VEALRNVREL DLMGRLAEAV
SRVDPKDARN RRLYAQYLID SGKASAAIDL LKPLAARLAK DHPEHAEATG LLGRAYKQIF
FDAGDTSSAG AREALKQAIA AYRRPYEENR RANAWQGVNL LALLSRARSV GLRVAPDLQP
AELAAELVAT LEAVPVAERD KWYLSTLTEA RLGLGLDAGH MDELERQLHA YVSAPGTAAF
QIASTLRQFT QVWGLDDARP AARGFDPAAN RARNLPQILR ARLLQLPGGG LEMSSGQLQS
LRSAPPPEAG QLEAVLGTQG PQTFAWWRAG LESARSVAVI RQKLGRRLGT GFLVRAADFG
LTPGEELLVL TNFHVVNANG ASPGIKPAAA EVVFEAADPG RVYTVSELLW SSPPDQHDAS
LLRLSTPVAD IAPLVIASEL PPRPVAVADA SAAGASADAP QVYVVGYPGG RELSFSFQDN
ELLDHEGPDG GQPQIPGVCR VHYRAPTEGG SSGSPVFNAT AWEVIALHHK GGKFGMPRLN
GQPGTYAANE GLAINTLIAA MHAR
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