Gene Lcho_0461 details

Gene Information

• Locus tag: Lcho_0461
• ID: 6160560
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 500997
• End bp: 501572
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641663210
• Product: glutathione peroxidase
• Protein accession: YP_001789501
• Protein GI: 171057152
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0386] Glutathione peroxidase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 72
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACAACC CCTTCCGTCG TCGAGCCCTT CTGGGCCTTG CGGCCTGGCC GCTGGTGCTG 
GCATCGGGCC AGGCGTCGGG TGCGTCGACG GCCTGTCCGG CGCTGCTTGA CCGATCGATC 
CCCCGGCTTC AGGACGAGCA GGCGCAAGCA CTCTGCCAGT ACAGCGGCAA GGTGCTGTTG 
ATCGTGAACA CCGCCAGCGC CTGCGGCTAC ACCTCGCAAT ACGAGGGGCT GCAGAAGCTG 
CATGAACAGT ACCGCGAGCG CGGCCTGGTG GTGATGGGTT TTCCGTCCAA CGACTTCGCC 
GGCCAGGAGT CGGGCGACAA CCGGCAGATC GCCGAGTTCT GCGAGAACCA GTTCGCCGTG 
CGCTTCCCGA TGTTCGTCAA GGGCGCCGTG CGGGGCCCGC AGGCGCAGCC GCTGTATGCC 
GACCTGAAGC GGCTGAGCGG CCAGGCGCCG GGCTGGAATT TCCACAAGTA CCTGGTCGGC 
CGCGACGGCC GGTCGGTGCG CAGTTACGCC AGTGCCGTCG GCCCGGACGA TCGTCGTCTC 
AGGCTGGACA TCGAAACCTT CTTGAATGCC CGTTGA 

 

Protein sequence

MDNPFRRRAL LGLAAWPLVL ASGQASGAST ACPALLDRSI PRLQDEQAQA LCQYSGKVLL 
IVNTASACGY TSQYEGLQKL HEQYRERGLV VMGFPSNDFA GQESGDNRQI AEFCENQFAV 
RFPMFVKGAV RGPQAQPLYA DLKRLSGQAP GWNFHKYLVG RDGRSVRSYA SAVGPDDRRL 
RLDIETFLNA R