Gene Lcho_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0457 
Symbol 
ID6163911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp497929 
End bp498498 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content63% 
IMG OID641663206 
ProductYceI family protein 
Protein accessionYP_001789497 
Protein GI171057148 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT CCCTGCTTGC CCTGGCCGCC GTGTCGGCAT TCGTCACCGG TACCGCCCAG 
GCGGCGACCT ACGCGATCGA GCCGACCCAC ACGTTCGTGA CCTTCGAGAT CGGCCACTTC 
GGCACCAGCA CGAACCGTGG CCGCTTCGAC AAGAAGGAAG GCACGGTCCA GTTCGACCGC 
GCAGCCAAGA CCGGCAAGGT CGACATCACG ATCGACGTCG CGTCGATCAA CACCGGCACC 
GGCCCGTTCA ACAGCCACAT CAAGAGCGCC GAGATCCTCG ACGCCGAGAA GTTTCCGACG 
GCACGTTTCG TGGGTGACAA GTTCGTCTTC ACCGGCGACA AGGTCAGCGA AGTCAGCGGC 
ATGTTCACGC TGATGGGCAA GACCCTGCCG CTGACGCTCA AGGCCACGCA GTTCAACTGC 
TACGACAGCC CGATGCTCAA GCGCGAGGTG TGCGGTGGTG ACTTCGAGGC GACCCTCAAG 
CGCAGCGCCT GGGGCGTGAA GTACGGCCTG GACTGGGGTT TCCAGGATGA CATCCGCCTG 
GTAATCCAGA CCGAAGCGGT CAAGCAGTAA
 
Protein sequence
MKKSLLALAA VSAFVTGTAQ AATYAIEPTH TFVTFEIGHF GTSTNRGRFD KKEGTVQFDR 
AAKTGKVDIT IDVASINTGT GPFNSHIKSA EILDAEKFPT ARFVGDKFVF TGDKVSEVSG 
MFTLMGKTLP LTLKATQFNC YDSPMLKREV CGGDFEATLK RSAWGVKYGL DWGFQDDIRL 
VIQTEAVKQ