| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0376 |
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| Symbol | |
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| ID | 6163866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 410901 |
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| End bp | 412268 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663125 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001789416 |
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| Protein GI | 171057067 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00751942 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATCCG CCCTTTCCGA TCGCCTGTCC AAACTAGTCA AGACGATGCG CGGCCAGGCG
CGCATCACCG AATCCAACGT GCAGGACATG CTGCGCGAAG TGCGCATGGC CCTGCTCGAG
GCCGACGTCG CCCTGCCGGT GGTGCGCGAC TTCATCGCCC GCGTCAAGGA GAAGGCACTC
GGCCAGGAGG TCGCCGGCTC GCTCAACCCG GGTCAGGCGC TGGTCGGCAT CGTGCACAAG
GAGCTCGCCG CCACCATGGG CGAGGGGGTG TCCGACATCA ACCTCACGGT GCAGCCGCCG
GCGGTGATCC TGATGGCCGG CCTGCAGGGC GCGGGCAAGA CCACCACCAC CGCCAAGCTG
GCCAAGCACC TGATCGAGCG ACGCAAGAAG AAGGTGCTGA CGGTCTCGGC CGACGTCTAC
CGCCCGGCCG CCATCGAGCA GCTCAAGACG GTGACGAGGC AGGCCGGCGC CGAGTGGTTC
CCGAGCCAGG GCGACCAGAA GCCGCGCGAC ATCGCGCTGG CCGCGATCGA CTACGCCCGC
AAGCACCACT TCGACGTGCT GCTGGTCGAC ACCGCCGGCC GACTGGCGAT CGACGAAGCG
CTGATGGCCG AGATCAAGGA CCTGCACGCC ACGCTCACCC CGATCGAGAC GCTGTTCGTG
GTCGACGCGA TGCAGGGCCA GGACGCCATC AACACCGCCC GCGCCTTCAA GGAGGCGCTG
CCGCTGACCG GCATCGTGCT GACCAAGCTC GACGGCGACT CGCGGGGTGG CGCGGCGCTG
TCGGTGCGCA GCATCACCGG CGCGCCGATC AAGTTCGCCG GCGTGTCCGA GAAGATCGAC
GGCCTGGAGG TCTTCGACGC CGACCGCCAC GCCGGCCGCG TGCTCGGCAT GGGCGACATC
GTGGCGCTGG TCGAGGAGGT ACAGAAGGGC GTGGACATGC AGTCCGCGCA GAAACTGGCC
GACAAGATCA AGAGCGGCGA TGCCTTCGAC CTGAACGACT TCCTGTCGCA GCTCAGCCAG
ATGAAGAAGA TGGGCGGGCT GTCGAGCCTG CTCGAGAAGC TGCCGGCCGA GATGGCCGCC
AAGGCCGGCC AGGCCGACAT GGGCAAGGCC GAGAAGGACG TGCGCCGGAT GGAGGGCATG
ATCAATTCGA TGACGCCGCT CGAACGCCGC AAGCCCGACC TGATCAAGGC CAGCCGCAAG
CGCCGCATCG CCGCCGGTGC CGGCGTGCAG GTGCAGGAAG TCAACCGCAT GCTCAACCAG
TTCGAGCAGA TGCGCGACAT GATGAAGAAG ATGAAGGGCG GTGGCCTGAT GAAGATGATG
AAGCGCTTCG GCGGTGCCAA GCGCGGCTTC CCCGGCATGG GCCGGTGA
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| Protein sequence | MASALSDRLS KLVKTMRGQA RITESNVQDM LREVRMALLE ADVALPVVRD FIARVKEKAL
GQEVAGSLNP GQALVGIVHK ELAATMGEGV SDINLTVQPP AVILMAGLQG AGKTTTTAKL
AKHLIERRKK KVLTVSADVY RPAAIEQLKT VTRQAGAEWF PSQGDQKPRD IALAAIDYAR
KHHFDVLLVD TAGRLAIDEA LMAEIKDLHA TLTPIETLFV VDAMQGQDAI NTARAFKEAL
PLTGIVLTKL DGDSRGGAAL SVRSITGAPI KFAGVSEKID GLEVFDADRH AGRVLGMGDI
VALVEEVQKG VDMQSAQKLA DKIKSGDAFD LNDFLSQLSQ MKKMGGLSSL LEKLPAEMAA
KAGQADMGKA EKDVRRMEGM INSMTPLERR KPDLIKASRK RRIAAGAGVQ VQEVNRMLNQ
FEQMRDMMKK MKGGGLMKMM KRFGGAKRGF PGMGR
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