| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0332 |
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| Symbol | |
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| ID | 6160384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 359684 |
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| End bp | 361954 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663081 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001789372 |
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| Protein GI | 171057023 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA AGAGTTCCAA GTACGACGGC AGCTTCCTGG CCGACGCCCT CCCGACCTTC
ATCAACGAGG CCAACGAACA GACCGAGTCG CTCGAACAGC TGCTGCTGCA GCTCGAGGAA
CAGCCCGGCG ACCGCGACCT GCTGGACGCG CTGTTCCGCT GCGCCCACAC CGTCAAGGGA
TCGGCCGGCA TGTTCGGTCT GGACAAGGTG GTCGACTTCA CCCACCACGT CGAGACGCTG
CTGTCGCGCA TCCGCGACGG CCTGATCGAC CTGGACCTGG GCGTGAGCAC GCTGCTGCTG
CAGTGCAACG ACCAGATCCG CCACCTGATC GGCAGCGCCG CCGACGCCGG TGCCGACACG
CCCGAGCAGG TCGAGCGCCG CGCCGACCTG GTGATGCAGC TGCACGCGCT GCTGGGCGCA
TCCGACCGCC GTGCGGCGGC CGCCGGCCCG GCCGATGCGT CGGTCGATCC GCCGGCCGAC
GCGCCCGACG ACGATGCGCC CATGCTGCGC TGGCACGTGT CGGTGCAGTT CGGCCCCGAG
ACCTTCCGCA ACGGCATGGA CCCGCTGGCG GTCATCGCCT ACCTCGAGAC CCTCGGCAGC
GTCGAGGCGA TCGGCTGCGA TCAGGCGGCG ATCCCGGCGC TCGACGTGAT CGACGCCGAG
CAGTGCCACC TGGCCTTCGA GGTCTGCATC GACACCCGCG CCACCCGCGA GGAGCTTGAA
GGTGCCTTCA GCTTCGTGCG CGACGACTGC GTGCTCCACC TGATCGACCT GCCCGAAGGG
CCCGGGCGGC TGGCCCGCCT GATCGAGGCG CTGCCCGACC GCCCGCGCCT GGGCGACATC
CTGATGTCGA TCGGCGCCGT CACCCACGCC CAGTTGCAGG CCTGCCTGAA TCAGCAGGCG
CAGAACCGGC TCGCCACGCC CGACGAGGTG CCCCTGCTCG GCGAGCTGCT ACAGACCAAG
GCGGGCGTGC ACGGCGAGGT CGTCGCGGCC GCGCTGGACA AGCAGCGCAA GCAGCGCGAC
CCGGCGCCCG GCGACGAGAA CCGCTACATC CGCGTGCACG CCGACCGGCT CGATGCCGTG
ATCAACCTGC TCGGCGAGCT GGTGATCGCC GGCGCGGGTG CGGCGATGCT GGCGCGCCAG
ACCCGCCAGC GCAATCTGCA CGAGGCCAAC CAGAACGTCG TGCGGCTGAT CGAGGAGATC
CGCAACGGCA CGCTGCAGCT GCGCATGGTG CCGATCGGCG AGACCTTCAG CCGCTTCCGC
CGGGTGGTGC GCGACACCGC CTCGCAGCTG GGCAAGGAGG TGACGCTGGA GATCGTCGGC
GGCGAGACCG AACTCGACAA GTCGATGGTC GAGCGCATCG CCGACCCGCT GATGCACCTG
GTGCGCAACG GCCTCGACCA CGGCCTGGAG ACGCCGGCCG AGCGCCAGGC CGCCGGCAAG
CCCGCGGTCG GCCGGCTGGT GCTGAGCGCG CGCCACGAGT CGGGCAGCGT GCTGATCCGC
ATCGACGACG ACGGCCGCGG TATCCACCGC GAACGCGTGC TGCAGCGCGC CTGGGACCGC
GGCCTGCTCG AGCGCGGCAC GCGCCCGCCC GACGCCGAGA TCCTGAAACT GATCTTCGAG
CCCGGCTTCT CGACCGCCGA ACAGGTCACC AGCCTGTCGG GGCGGGGTGT CGGCATGGAC
GTGGTGCGCC GCAACATCGA GGCCCTGCGC GGCAGCGTGC AGCTGCACAG CACCGAGGGC
CTCGGCACGC GCATCGACAT CCGCCTGCCG CTGACGCTGG CGATCATCGA CGGCTTCCTG
GTCAGCGTCG GGGCGTCGAA GTTCATCTTT CCGCTCGACA CCGTGGTCGA GGTGATCGAG
AACCGGCCGA CCACCACCGG GTTCGATCGC CGCGGCCGCG GCACCGTCGA GCTGCGCGGG
CAGGTGCTGC CGGTGGTCAG CCTGCGGGTC TTCTACGACC TCGAATCGCC ACCGCCCGAG
CGCGACAACA TCATCGTCGT CAACGCCGGC GAAGCGCCGT TCGGCATCGT GGTCGACGCG
CTGCTCGGCC AGCACCAGAC CGTCATCAAG CCGCTCGGGC GCATCTTCAA GATGCTGCGC
GGCCTGTCCG GCTCATCGAT TCTCGGCAAT GGCGAGGTGG CCCTGATCGC CGACGTCATG
TCGCTCAGCC ACCTGGCGGC GCAGCCGCCA CGCGTTCACG TTCCAGCCTC CCGGCGCACC
AGCGACAACG GCCCGACGGC CCAAACCCAG TCCGAAGGAC AAGCATCATG A
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| Protein sequence | MKKKSSKYDG SFLADALPTF INEANEQTES LEQLLLQLEE QPGDRDLLDA LFRCAHTVKG
SAGMFGLDKV VDFTHHVETL LSRIRDGLID LDLGVSTLLL QCNDQIRHLI GSAADAGADT
PEQVERRADL VMQLHALLGA SDRRAAAAGP ADASVDPPAD APDDDAPMLR WHVSVQFGPE
TFRNGMDPLA VIAYLETLGS VEAIGCDQAA IPALDVIDAE QCHLAFEVCI DTRATREELE
GAFSFVRDDC VLHLIDLPEG PGRLARLIEA LPDRPRLGDI LMSIGAVTHA QLQACLNQQA
QNRLATPDEV PLLGELLQTK AGVHGEVVAA ALDKQRKQRD PAPGDENRYI RVHADRLDAV
INLLGELVIA GAGAAMLARQ TRQRNLHEAN QNVVRLIEEI RNGTLQLRMV PIGETFSRFR
RVVRDTASQL GKEVTLEIVG GETELDKSMV ERIADPLMHL VRNGLDHGLE TPAERQAAGK
PAVGRLVLSA RHESGSVLIR IDDDGRGIHR ERVLQRAWDR GLLERGTRPP DAEILKLIFE
PGFSTAEQVT SLSGRGVGMD VVRRNIEALR GSVQLHSTEG LGTRIDIRLP LTLAIIDGFL
VSVGASKFIF PLDTVVEVIE NRPTTTGFDR RGRGTVELRG QVLPVVSLRV FYDLESPPPE
RDNIIVVNAG EAPFGIVVDA LLGQHQTVIK PLGRIFKMLR GLSGSSILGN GEVALIADVM
SLSHLAAQPP RVHVPASRRT SDNGPTAQTQ SEGQAS
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