Gene Lcho_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0256 
Symbol 
ID6160532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp271937 
End bp272416 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID641663000 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_001789296 
Protein GI171056947 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00658602 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGATCC CTGCACGTCT GTCGAGTTAT CTCGAGCAAC GCGGCCTGCA TTACGAGGTC 
TGCACCCACC CCCACAGCCA CAACAGCGCG CAGACCGCGC GCAACGCCCA CGTGATGCGC 
CAGCAGCTCG CCAAATCGGT GCTGCTCGAA GACGACGAAG GCCCGCTGGT GGCGGTGGTG 
CCGGCCGACC AGATGGTGCT GGTGGGCGTG GTCGCGCGCA TGCTCGGGCG CAAGCAGCTG 
CACCTGTCCG ACGAGGCCGC GATGATGCGG CTGTTCGACG GCTGCGAGCG CGGCGCTCTG 
CCGCCGGTGG GCATGGCCTG GGGCGTCGAG ACCGTCGTCG ACGAGACGCT CGAATCGATG 
GATGCGGTCT ACCTCGAGGT CGGCGACCAC GAGCACCTGC TGCGCATGCC GCACGACGAC 
TTCCATCGCC TGATGAGCAG CGCGCGCCAC GGCCACATCG GCAAGCTGCC GATGCACTGA
 
Protein sequence
MSIPARLSSY LEQRGLHYEV CTHPHSHNSA QTARNAHVMR QQLAKSVLLE DDEGPLVAVV 
PADQMVLVGV VARMLGRKQL HLSDEAAMMR LFDGCERGAL PPVGMAWGVE TVVDETLESM 
DAVYLEVGDH EHLLRMPHDD FHRLMSSARH GHIGKLPMH