10 homologs were found in PanDaTox collection
for query gene Lcho_0039 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_0039    100 
 
 		 1175 bp  2329    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.35436 
 
 
-
 
NC_010625  Bphy_6199  3-isopropylmalate dehydratase  80.41 
 
 		 1962 bp  105  3e-20  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0449269 
 
 
-
 
NC_013440  Hoch_0166  aconitate hydratase domain protein  85.51 
 
 		 1980 bp  58  0.000006  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_3315  glycogen debranching enzyme GlgX  100 
 
 		 2136 bp  52  0.0004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_4646  3-isopropylmalate dehydratase  82.72 
 
 		 1968 bp  50.1  0.001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.715504  normal  0.524073 
 
 
-
 
NC_007493  RSP_1806  aconitate hydratase  100 
 
 		 2745 bp  48.1  0.006  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_0452  aconitate hydratase  100 
 
 		 2685 bp  48.1  0.006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.694166  normal  1 
 
 
-
 
NC_009656  PSPA7_3434  hypothetical protein  91.67 
 
 		 924 bp  48.1  0.006  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1619  type II secretion system protein  96.43 
 
 		 1254 bp  48.1  0.006  Opitutus terrae PB90-1  Bacteria  normal  0.32489  normal  1 
 
 
-
 
NC_013440  Hoch_3241  PEP-utilising protein mobile region  100 
 
 		 2277 bp  48.1  0.006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.149949  normal  1 
 
 
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