| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1848 |
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| Symbol | |
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| ID | 4439209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1838897 |
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| End bp | 1839970 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639673664 |
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| Product | ABC transporter periplasmic protein |
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| Protein accession | YP_819541 |
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| Protein GI | 116630388 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000897404 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00084927 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTAA ATAAAAAATT TTCTCTATTA CTAATAGCAA GTATGATCTT TCTAAGCTTA
AGTGCTTGTA GCAAACCCAC TCATGAAGAC CAAACAAATA AAAAATTAAC TAATCACATC
GCCTTAATCT CAGACACCAA CGGCATTAAG GATAATTCTT TAAATCAATC TGCTTGGCAA
GGTGTTAAGA ATTACGGTAC TAAGAATAAT CTTGTTGAAG GAAATAAAGG CTACAATTAC
TTCGTTCCTA AAGATCCTAA AGATTATCAA GCAACCATCT CAAAAGCCTT AGACAATGAT
TTTTCAACAA TTATTGGCGT TGGTTATACA CTTAGGCCTA ATATTATTAA GGCAGCTAAG
AATAATCCTA AAAAGAACTT TGTTATTATT GATACTCATG CTTCTAAGAT CAAAAACTTG
GCTAGTATCT CTTTTAAAAA TCAAGAAGGA GCTTATTTAG CAGGCGTTGC AGCTGCCTAC
ACCACAAAAA GCCACACAGT GGGACTTATT TTAGGACAAG ACAGTAAAGA AATGGATTCC
TTTAAAGCTG GTTTTACTCA AGGTGTTGCA GCTACTAGCC GTAAACTTCA CAAGCATATT
AAAGTATTAA CCCAAACTGT AGGTAACTTT TCGGATGCTA ATAAAGCTCA TGATATTGCC
CAGGAAATGT ACAGCAAGAA AGCTGATATA ATCTTTCAAG CTGCAGGCAA AAGCGGTCAA
GGCGTCTTTA AGGCTGCCAA AGAAGTCAAT CAAGCCAATC CGGTAGGACA AAAAGTTTGG
GTTATTGGTT CAGATGAGGA TCAAACAAAA CTTGGAAATT ACCAGGCAAA AGGCGGTCAA
CCAGCTAATT TTACCCTTAC CTCTGTAATC AAAAGCGCAG ATGTAGCTGT TGAAGATCTT
GCTAATCAAA CTGCTAAGGG TGATTTTCCT GGTGGAAAGA ACTTAAATTA CGGTCTTAAA
AACAAGGGTA TTTCTCTAGT ACAAGGTAAT TTATCTTATC ACACCTGGAT CAAAGTTCAG
AAAGCTAAGC AGAAAATTAT TGATGGTAAA ATCAAAATAA TGGTTGATCG CTAA
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| Protein sequence | MKLNKKFSLL LIASMIFLSL SACSKPTHED QTNKKLTNHI ALISDTNGIK DNSLNQSAWQ
GVKNYGTKNN LVEGNKGYNY FVPKDPKDYQ ATISKALDND FSTIIGVGYT LRPNIIKAAK
NNPKKNFVII DTHASKIKNL ASISFKNQEG AYLAGVAAAY TTKSHTVGLI LGQDSKEMDS
FKAGFTQGVA ATSRKLHKHI KVLTQTVGNF SDANKAHDIA QEMYSKKADI IFQAAGKSGQ
GVFKAAKEVN QANPVGQKVW VIGSDEDQTK LGNYQAKGGQ PANFTLTSVI KSADVAVEDL
ANQTAKGDFP GGKNLNYGLK NKGISLVQGN LSYHTWIKVQ KAKQKIIDGK IKIMVDR
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