Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1787 |
Symbol | |
ID | 4438986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1773111 |
End bp | 1774331 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673604 |
Product | immunity protein PlnI |
Protein accession | YP_815609 |
Protein GI | 116630340 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000738344 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 4.86279e-21 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGAGA AAGCACGCTA TACATTAATT GCTGAATTAG TACTGGGAAT ATTTTTTTAT CTTTTTTTAT ATCTTAATCC AGGCTTGAGA CATCAATTAT GGTTACAGCA TAATGAAGTT TTTCTACTAA TATTTTTCTC TCCATTGTTA GTTTTAATGC TATTACTAGA GCTCTGGCAG AAAAAGCCGC CCAAAGTTGA TACTTTCAAT CGATGGTTGA TGATTATCTT TTTGCCTTTA TTGTCGTTAG GCGGCTGGAT TGAATTAATG AACGTAGTAG CAAAGATATG GCCACGTATG GGTGCAATAG TAGCATTCAT CTTTCTCTTG ATAGGATTAG TGTGGCTAAT CCCTTTTGCA ATTGCAGTAG GTGCTGAAGT TAAGTGGACT GTTCCGCGTC TAATTTTAGT CTTTTGGATG ATGGAAAATC TAATGGAAAT ATGTACTCTA GGACATATCC CGGGCAATAA GTTCTTCAAT ACAATTCTCT CTACAGGATT ATGGGCTGCT TTTGCCTATA CTATTTGGGC TTGTTTTTTA GCTCGGGGAT GGGGCTATAA TTTTGACTTT AATTTAAAAT TTAAAAAATC AATTAATTTC TCTGATGGTG TATTGGCATT TTTAATTATT TTTGGAATTG TTGATATTAT ATGGAATGCA TTTGGGGGAT ATGGCAATAA CTTGTTTTCT GTCCTTTTTT CCTATCATGC TGATCCAATG AAATTTACTT TGAATAGTTT TAGTCAAGCT GCTGAAGCGG GAATAATGGA AGAGATGAAT CGATATCTAG TGATCATTGT TCTCTTATAC GCTTTAAGAA AGAACAAATG GCAAGTTCCA GTGACTATTT TTATTAGTGC TTTATTTTTC GGCTTACTTC ATTTTGCTAA TTTCGGGTGG CAAAAATTAG CTCCAACTAT TGCTCAAGTT ACATTTGCAT TTGGTATAGG ATTGTTTTTT GCGGTTGTTT ATTTATATAC TGGTAAATTA TGGCTAACAA TGTTAATGCA TTTTTTTGTA GATTTTCTAA TTTTTTTACA AGAAAATGGA GATCAACCTG GTACTTGGAA TGGGAGCACA GGTGAATGGT TAGTTGCCAT TATTTCAGTA GTCGTTCCGG TATGCATTTA TTTGTGGATG ATTACGGGAA AGCGAAAGTT AGTAATGGAG GAAAATAGTA GGCGTATCTT ACAACCAGTA ACTAATAATT TAATGTATTA A
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Protein sequence | MKEKARYTLI AELVLGIFFY LFLYLNPGLR HQLWLQHNEV FLLIFFSPLL VLMLLLELWQ KKPPKVDTFN RWLMIIFLPL LSLGGWIELM NVVAKIWPRM GAIVAFIFLL IGLVWLIPFA IAVGAEVKWT VPRLILVFWM MENLMEICTL GHIPGNKFFN TILSTGLWAA FAYTIWACFL ARGWGYNFDF NLKFKKSINF SDGVLAFLII FGIVDIIWNA FGGYGNNLFS VLFSYHADPM KFTLNSFSQA AEAGIMEEMN RYLVIIVLLY ALRKNKWQVP VTIFISALFF GLLHFANFGW QKLAPTIAQV TFAFGIGLFF AVVYLYTGKL WLTMLMHFFV DFLIFLQENG DQPGTWNGST GEWLVAIISV VVPVCIYLWM ITGKRKLVME ENSRRILQPV TNNLMY
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