9 homologs were found in PanDaTox collection
for query gene LGAS_1787 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_1787  immunity protein PlnI  100 
 
 
406 aa  811    Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000000738344  hitchhiker  4.86279e-21 
 
 
-
 
NC_009513  Lreu_1515  abortive infection protein  31.61 
 
 
395 aa  141  1.9999999999999998e-32  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0102  immunity protein PlnI  29.08 
 
 
404 aa  124  4e-27  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.0000000000029241  hitchhiker  0.00000103836 
 
 
-
 
NC_008530  LGAS_0479  metal-dependent membrane protease  31.86 
 
 
260 aa  54.7  0.000003  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00220695  normal  0.683516 
 
 
-
 
NC_008528  OEOE_0966  immunity protein PlnI  33.66 
 
 
252 aa  53.5  0.000006  Oenococcus oeni PSU-1  Bacteria  normal  0.0817583  n/a   
 
 
-
 
NC_008528  OEOE_1841  CAAX family protease  35.42 
 
 
286 aa  53.5  0.000007  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2140  abortive infection protein  33.98 
 
 
257 aa  44.7  0.003  Jannaschia sp. CCS1  Bacteria  normal  0.533552  normal  0.611638 
 
 
-
 
NC_011898  Ccel_0915  Abortive infection protein  27.34 
 
 
284 aa  45.1  0.003  Clostridium cellulolyticum H10  Bacteria  normal  0.17238  n/a   
 
 
-
 
NC_013165  Shel_22120  CAAX amino terminal protease family  32.35 
 
 
254 aa  43.5  0.007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  hitchhiker  0.00629763 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>