Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1459 |
Symbol | |
ID | 4440611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1446168 |
End bp | 1447220 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673289 |
Product | Beta-lactamase class C related penicillin binding protein |
Protein accession | YP_815255 |
Protein GI | 116630083 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.264977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 130 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAA TAGTTATGCA TCATAAAAAA ATTATCTTCT ATATCTTTTT GGCGCTCTGT ATGTTTTCAG TGTTTTTATT TATTGTACCT TCAGGAAGCA GGATAGATCC TGGACTTAAA AACTCACAAA GACAGCTTAA AAATTACATG AAATCGAATC ATATCAATGG TGTGATGCTC GTTAGCGGAA AAGACGGAAA ACCTGTTGTC ATTAAGAATA ATGAAACGTC TAACAAAAAT GACATAGTAA ATGTGGATCA ACTATTTCCA ACTGCTTCCT TGCAAAAGAT TATGACAGGA ACTGCAATTT ATAATTTGCA GCAAAAAAAG GAGCTTGGTT GGAATACGAC TTTATCTAAA TATTATCCAC AAGTTTCAGG CAGCAGCGAT ATAACGATTC GTGAATTGAT GAATCATACA AGTGGATTGA TTAATAATGC TCGTCCATCT GAACCGCTTA AAAATCAAGA AGAACAAATT GCTTATATGC TTAAATATAT GCAAAACGAT CACCTTCATA CGTGGGACTA TCAAGATGTA GACTACGAGT TATTAGCAGC AATTATCAGT AAGGAAAGTC ATTTGAGCTA TAACGACTAT ATTCAAAAAA ATTTTGCTAA GCCATTAAAA TTGCACCAAA TTAAGGATTA TTCTGAAGTT AAGCAAAATG AAGTTTCTCA ACCAATGAGT AGCAATGTTG ACTGGCATAA GGTAGTTGTT ACGACATCAT CTGATTTTGG AGCAGGAAAC TTATTTATAT CACCTAATGA TTATTGGAAG TTTGTGTATA ACAAAGTGTT AAAAGATCCT AAGATGATTA ATGAATATGC TCAGCAAGCT AGACGTCAGG CAGTCGCTTA CTATGGCGGG GTCTACTTCA AGGGGGATGT TATCCGAGCA GAAGGAAGTA TTCCAGGATA TAATTCTTGT TTTGTCGCAA ACTATAGAAC GAAAGAAATG ATTATGCTGT TTTCTAATAA TATTAATTAC TTAACATTAA AGAAAGCATC TGATTATTTG CTTCGTCATT ATATGGGGAC GGGACTATTT TAA
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Protein sequence | MKGIVMHHKK IIFYIFLALC MFSVFLFIVP SGSRIDPGLK NSQRQLKNYM KSNHINGVML VSGKDGKPVV IKNNETSNKN DIVNVDQLFP TASLQKIMTG TAIYNLQQKK ELGWNTTLSK YYPQVSGSSD ITIRELMNHT SGLINNARPS EPLKNQEEQI AYMLKYMQND HLHTWDYQDV DYELLAAIIS KESHLSYNDY IQKNFAKPLK LHQIKDYSEV KQNEVSQPMS SNVDWHKVVV TTSSDFGAGN LFISPNDYWK FVYNKVLKDP KMINEYAQQA RRQAVAYYGG VYFKGDVIRA EGSIPGYNSC FVANYRTKEM IMLFSNNINY LTLKKASDYL LRHYMGTGLF
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