Gene LGAS_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1459 
Symbol 
ID4440611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1446168 
End bp1447220 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content34% 
IMG OID639673289 
ProductBeta-lactamase class C related penicillin binding protein 
Protein accessionYP_815255 
Protein GI116630083 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.264977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones130 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAA TAGTTATGCA TCATAAAAAA ATTATCTTCT ATATCTTTTT GGCGCTCTGT 
ATGTTTTCAG TGTTTTTATT TATTGTACCT TCAGGAAGCA GGATAGATCC TGGACTTAAA
AACTCACAAA GACAGCTTAA AAATTACATG AAATCGAATC ATATCAATGG TGTGATGCTC
GTTAGCGGAA AAGACGGAAA ACCTGTTGTC ATTAAGAATA ATGAAACGTC TAACAAAAAT
GACATAGTAA ATGTGGATCA ACTATTTCCA ACTGCTTCCT TGCAAAAGAT TATGACAGGA
ACTGCAATTT ATAATTTGCA GCAAAAAAAG GAGCTTGGTT GGAATACGAC TTTATCTAAA
TATTATCCAC AAGTTTCAGG CAGCAGCGAT ATAACGATTC GTGAATTGAT GAATCATACA
AGTGGATTGA TTAATAATGC TCGTCCATCT GAACCGCTTA AAAATCAAGA AGAACAAATT
GCTTATATGC TTAAATATAT GCAAAACGAT CACCTTCATA CGTGGGACTA TCAAGATGTA
GACTACGAGT TATTAGCAGC AATTATCAGT AAGGAAAGTC ATTTGAGCTA TAACGACTAT
ATTCAAAAAA ATTTTGCTAA GCCATTAAAA TTGCACCAAA TTAAGGATTA TTCTGAAGTT
AAGCAAAATG AAGTTTCTCA ACCAATGAGT AGCAATGTTG ACTGGCATAA GGTAGTTGTT
ACGACATCAT CTGATTTTGG AGCAGGAAAC TTATTTATAT CACCTAATGA TTATTGGAAG
TTTGTGTATA ACAAAGTGTT AAAAGATCCT AAGATGATTA ATGAATATGC TCAGCAAGCT
AGACGTCAGG CAGTCGCTTA CTATGGCGGG GTCTACTTCA AGGGGGATGT TATCCGAGCA
GAAGGAAGTA TTCCAGGATA TAATTCTTGT TTTGTCGCAA ACTATAGAAC GAAAGAAATG
ATTATGCTGT TTTCTAATAA TATTAATTAC TTAACATTAA AGAAAGCATC TGATTATTTG
CTTCGTCATT ATATGGGGAC GGGACTATTT TAA
 
Protein sequence
MKGIVMHHKK IIFYIFLALC MFSVFLFIVP SGSRIDPGLK NSQRQLKNYM KSNHINGVML 
VSGKDGKPVV IKNNETSNKN DIVNVDQLFP TASLQKIMTG TAIYNLQQKK ELGWNTTLSK
YYPQVSGSSD ITIRELMNHT SGLINNARPS EPLKNQEEQI AYMLKYMQND HLHTWDYQDV
DYELLAAIIS KESHLSYNDY IQKNFAKPLK LHQIKDYSEV KQNEVSQPMS SNVDWHKVVV
TTSSDFGAGN LFISPNDYWK FVYNKVLKDP KMINEYAQQA RRQAVAYYGG VYFKGDVIRA
EGSIPGYNSC FVANYRTKEM IMLFSNNINY LTLKKASDYL LRHYMGTGLF